RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 C1orf220Q5T0J3 134 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 TRPM4Q8TD43 1214 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 TRIM11Q96F44 468 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 TSNARE1Q96NA8 513 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 MTMR12Q9C0I1 747 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 EPB41L4BQ9H329 900 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 ACAD9Q9H845 621 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 ZNF302Q9NR11 478 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 IL1RAPL1Q9NZN1 696 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 IP6K2Q9UHH9 426 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 SMG5Q9UPR3 1016 aaKnown RBP13.8□□□□□ -0.2
NFKB1-202ENST00000394820 NR2E3Q9Y5X4 410 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 PEX1O43933 1283 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 PRPSAP2O60256 369 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 KCNA4P22459 653 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 RPL10AP62906 217 aaKnown RBP13.8□□□□□ -0.2
NFKB1-202ENST00000394820 UMODL1Q5DID0 1318 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 VSIG10LQ86VR7 867 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 LMO3Q8TAP4 145 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 PRR11Q96HE9 360 aaPredicted RBP13.8□□□□□ -0.2
NFKB1-202ENST00000394820 ADPGKQ9BRR6 497 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 TRIM56Q9BRZ2 755 aaKnown RBP13.8□□□□□ -0.2
NFKB1-202ENST00000394820 TEX13BQ9BXU2 312 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 M0QYV0 167 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 ZWINTO95229 277 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 PTPRAP18433 802 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 NELFEP18615 380 aaKnown RBP13.8□□□□□ -0.2
NFKB1-202ENST00000394820 ANXA13P27216 316 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 POLR2BP30876 1174 aaKnown RBP13.8□□□□□ -0.2
NFKB1-202ENST00000394820 CYP24A1Q07973 514 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 ZNF699Q32M78 642 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 LRRC74BQ6ZQY2 392 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 ZNF408Q9H9D4 720 aa13.8□□□□□ -0.2
NFKB1-202ENST00000394820 APOBEC2Q9Y235 224 aaKnown RBP13.8□□□□□ -0.2
NFKB1-202ENST00000394820 TBC1D12O60347 775 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 SEC24DO94855 1032 aaPredicted RBP13.79□□□□□ -0.2
NFKB1-202ENST00000394820 GJB1P08034 283 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 MMRN1Q13201 1228 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 PPP1R13LQ8WUF5 828 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 OTUD5Q96G74 571 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 FAXDC2Q96IV6 333 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 TTC25Q96NG3 672 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 CLIC5Q9NZA1 410 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 ZNF711Q9Y462 761 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 NCANO14594 1321 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 KBTBD13C9JR72 458 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 ADCY3O60266 1144 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 SUPT3HO75486 399 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 SNUPNO95149 360 aaKnown RBP13.79□□□□□ -0.2
NFKB1-202ENST00000394820 MT-CO1P00395 513 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 DSG3P32926 999 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 PSEN1P49768 467 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 ANKRD22Q5VYY1 191 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 CRELD2Q6UXH1 353 aaPredicted RBP13.79□□□□□ -0.2
NFKB1-202ENST00000394820 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.79□□□□□ -0.2
NFKB1-202ENST00000394820 TRAPPC12Q8WVT3 735 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 ATP2A3Q93084 1043 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 FAM49BQ9NUQ9 324 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 BTNL10A8MVZ5 291 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 DGAT1O75907 488 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 PAEPP09466 180 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 BCAR1P56945 870 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 MYL6P60660 151 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 AP2B1P63010 937 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 MGAT5Q09328 741 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 UBAP2LQ14157 1087 aaKnown RBP13.79□□□□□ -0.2
NFKB1-202ENST00000394820 MAP7Q14244 749 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 STXBP2Q15833 593 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 TRABD2AQ86V40 505 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 WDR75Q8IWA0 830 aaKnown RBP13.79□□□□□ -0.2
NFKB1-202ENST00000394820 FAM71AQ8IYT1 594 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 MCPH1Q8NEM0 835 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 TEPSINQ96N21 525 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 SYT15Q9BQS2 421 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 MAN1C1Q9NR34 630 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 APPL1Q9UKG1 709 aa13.79□□□□□ -0.2
NFKB1-202ENST00000394820 NFKBIEO00221 500 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 ENO3P13929 434 aaPredicted RBP13.78□□□□□ -0.2
NFKB1-202ENST00000394820 CCNG2Q16589 344 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 MAP7D1Q3KQU3 841 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 TMEM259Q4ZIN3 620 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 SLC39A4Q6P5W5 647 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 MOB2Q70IA6 237 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 ST13P4Q8IZP2 240 aaPredicted RBP13.78□□□□□ -0.2
NFKB1-202ENST00000394820 CCNYL1Q8N7R7 359 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 ZNF606Q8WXB4 792 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 NMUR2Q9GZQ4 415 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 DHX35Q9H5Z1 703 aaKnown RBP13.78□□□□□ -0.2
NFKB1-202ENST00000394820 ANKEF1Q9NU02 776 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.78□□□□□ -0.2
NFKB1-202ENST00000394820 SLC5A4Q9NY91 659 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 TNNC2P02585 160 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 TUBP50607 506 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 POU5F1Q01860 360 aaKnown RBP13.78□□□□□ -0.2
NFKB1-202ENST00000394820 AMHR2Q16671 573 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 KLHL38Q2WGJ6 581 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 LAYNQ6UX15 382 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 SPOCD1Q6ZMY3 1216 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 EIF1ADQ8N9N8 165 aaKnown RBP13.78□□□□□ -0.2
NFKB1-202ENST00000394820 RNF217Q8TC41 542 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms