RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 AGAP3Q96P47 875 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 TSPAN18Q96SJ8 248 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 FAM118BQ9BPY3 351 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 SAYSD1Q9NPB0 183 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 DNAJC25-GNG10A0A024R161 153 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 DNM1LO00429 736 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 LAG3P18627 525 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 GTF2F1P35269 517 aaKnown RBP eCLIP20.24■□□□□ 0.83
CXXC4-201ENST00000394767 ADCY1Q08828 1119 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 GPATCH2LQ9NWQ4 482 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 ATG7O95352 703 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 CXCL14O95715 111 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 KCNMA1Q12791 1236 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 CFAP57Q96MR6 1250 aa20.24■□□□□ 0.83
CXXC4-201ENST00000394767 PAX3P23760 479 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 POU5F1BQ06416 359 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 FOXR2Q6PJQ5 311 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 PCGF5Q86SE9 256 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 SPATA18Q8TC71 538 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 AMACRQ9UHK6 382 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 LRP5O75197 1615 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.23■□□□□ 0.83
CXXC4-201ENST00000394767 RTN3O95197 1032 aaPredicted RBP20.23■□□□□ 0.83
CXXC4-201ENST00000394767 MSH2P43246 934 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 ARSEP51690 589 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 MAPK7Q13164 816 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 ZNF177Q13360 481 aaPredicted RBP20.23■□□□□ 0.83
CXXC4-201ENST00000394767 SLFN11Q7Z7L1 901 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 NPAS4Q8IUM7 802 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 C16orf70Q9BSU1 422 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 MOSPD1Q9UJG1 213 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 ARL5CA6NH57 179 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 USP17L7P0C7H9 530 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 MTFR1Q15390 333 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 ULBP1Q9BZM6 244 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 SMYD2Q9NRG4 433 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 ADH1AP07327 375 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 FAM228AQ86W67 206 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 ATL2Q8NHH9 583 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 PCYT2Q99447 389 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 TTPALQ9BTX7 342 aa20.23■□□□□ 0.83
CXXC4-201ENST00000394767 E5RJQ4 531 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 CNGA2Q16280 664 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 GLE1Q53GS7 698 aaKnown RBP20.22■□□□□ 0.83
CXXC4-201ENST00000394767 ZNF449Q6P9G9 518 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 MINDY3Q9H8M7 445 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 SLC27A5Q9Y2P5 690 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 PDE4DIPQ5VU43 2346 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 CAPN2P17655 700 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 OR1D2P34982 312 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 ANO4Q32M45 955 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 SPATA4Q8NEY3 305 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 LACRTQ9GZZ8 138 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 BFARQ9NZS9 450 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 NUDT5Q9UKK9 219 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 KIF3CO14782 793 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 TRIM66O15016 1216 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 CUL1Q13616 776 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 ZNF268Q14587 947 aaPredicted RBP20.22■□□□□ 0.83
CXXC4-201ENST00000394767 PARD6BQ9BYG5 372 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 N4BP2Q86UW6 1770 aaPredicted RBP20.22■□□□□ 0.83
CXXC4-201ENST00000394767 DDX3XO00571 662 aaKnown RBP eCLIP20.22■□□□□ 0.83
CXXC4-201ENST00000394767 ACSL3O95573 720 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 COL5A3P25940 1745 aaPredicted RBP20.22■□□□□ 0.83
CXXC4-201ENST00000394767 FPGSQ05932 587 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 RBM23Q86U06 439 aaKnown RBP20.22■□□□□ 0.83
CXXC4-201ENST00000394767 PGBD3Q8N328 593 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 EPS8L1Q8TE68 723 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 DDI1Q8WTU0 396 aa20.22■□□□□ 0.83
CXXC4-201ENST00000394767 FRMD3A2A2Y4 597 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 TTLL13PA6NNM8 815 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 NUMBP49757 651 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 PDK1Q15118 436 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 CCDC149Q6ZUS6 474 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 MYH7P12883 1935 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 CST3P01034 146 aaPredicted RBP20.21■□□□□ 0.83
CXXC4-201ENST00000394767 UBE2OQ9C0C9 1292 aaKnown RBP20.21■□□□□ 0.83
CXXC4-201ENST00000394767 KIAA0100Q14667 2235 aaKnown RBP20.21■□□□□ 0.83
CXXC4-201ENST00000394767 ESYT3A0FGR9 886 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 RASSF10A6NK89 507 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 EOMESO95936 686 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 RBP3P10745 1247 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 NPR3P17342 541 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 DENND1BQ6P3S1 775 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 DENND5BQ6ZUT9 1274 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 EPM2AIP1Q7L775 607 aaPredicted RBP20.21■□□□□ 0.83
CXXC4-201ENST00000394767 C12orf29Q8N999 325 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 ADAM32Q8TC27 787 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 UXTQ9UBK9 157 aaPredicted RBP20.21■□□□□ 0.83
CXXC4-201ENST00000394767 BCORQ6W2J9 1755 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 EPHB6O15197 1021 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 CLCNKBP51801 687 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 MXRA7P84157 204 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 C1orf127Q8N9H9 656 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 MYLPFQ96A32 169 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 CERS4Q9HA82 394 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 CYBAP13498 195 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 PAMP19021 973 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 NR1H3Q13133 447 aa20.21■□□□□ 0.83
CXXC4-201ENST00000394767 MAPK8IP2Q13387 824 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms