RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 GALNT15Q8N3T1 639 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 SLC35B2Q8TB61 432 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 NKD2Q969F2 451 aaPredicted RBP16.28■□□□□ 0.2
PTBP1-204ENST00000394601 RBM41Q96IZ5 413 aaKnown RBP16.28■□□□□ 0.2
PTBP1-204ENST00000394601 RBM15Q96T37 977 aaKnown RBP eCLIP16.28■□□□□ 0.24e-7■■■□□ 14.9
PTBP1-204ENST00000394601 TTC1Q99614 292 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 FZD8Q9H461 694 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 DENND2DQ9H6A0 471 aaPredicted RBP16.28■□□□□ 0.2
PTBP1-204ENST00000394601 MINDY3Q9H8M7 445 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 ARHGEF3Q9NR81 526 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 NMRK1Q9NWW6 199 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 SBF1O95248 1867 aa16.28■□□□□ 0.2
PTBP1-204ENST00000394601 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.27■□□□□ 0.2
PTBP1-204ENST00000394601 B4GALT5O43286 388 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 PEX11AO75192 247 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 CALB1P05937 261 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 MAGEA4P43358 317 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 PRKG1Q13976 671 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 SGSM1Q2NKQ1 1148 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 ZNF394Q53GI3 561 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 SNX30Q5VWJ9 437 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 DENND1BQ6P3S1 775 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 LRRC71Q8N4P6 559 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 MCUR1Q96AQ8 359 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 ZNF518BQ9C0D4 1074 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 SDCBP2Q9H190 292 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 RXFP1Q9HBX9 757 aa16.27■□□□□ 0.2
PTBP1-204ENST00000394601 FARP1Q9Y4F1 1045 aaPredicted RBP16.27■□□□□ 0.2
PTBP1-204ENST00000394601 ANKRD33BA6NCL7 494 aa16.27■□□□□ 0.19
PTBP1-204ENST00000394601 TXNDC9O14530 226 aa16.27■□□□□ 0.19
PTBP1-204ENST00000394601 GSTT1P30711 240 aa16.27■□□□□ 0.19
PTBP1-204ENST00000394601 KAZNQ674X7 775 aa16.27■□□□□ 0.19
PTBP1-204ENST00000394601 SCG3Q8WXD2 468 aaKnown RBP16.27■□□□□ 0.19
PTBP1-204ENST00000394601 BCO2Q9BYV7 579 aa16.27■□□□□ 0.19
PTBP1-204ENST00000394601 PREBQ9HCU5 417 aa16.27■□□□□ 0.19
PTBP1-204ENST00000394601 PPME1Q9Y570 386 aa16.27■□□□□ 0.19
PTBP1-204ENST00000394601 ACTL7BQ9Y614 415 aa16.27■□□□□ 0.19
PTBP1-204ENST00000394601 SLC4A7Q9Y6M7 1214 aa16.27■□□□□ 0.19
PTBP1-204ENST00000394601 A0A0G2JND7 137 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 B4GALT4O60513 344 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 TPP2P29144 1249 aaPredicted RBP16.26■□□□□ 0.19
PTBP1-204ENST00000394601 RFC1P35251 1148 aaPredicted RBP16.26■□□□□ 0.19
PTBP1-204ENST00000394601 DUOXA2Q1HG44 320 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 VPS52Q8N1B4 723 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 DRAXINQ8NBI3 349 aaPredicted RBP16.26■□□□□ 0.19
PTBP1-204ENST00000394601 HIPK4Q8NE63 616 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 FAM81AQ8TBF8 368 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 DENND1AQ8TEH3 1009 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 STMN2Q93045 179 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 C12orf65Q9H3J6 166 aaKnown RBP16.26■□□□□ 0.19
PTBP1-204ENST00000394601 CHCHD3Q9NX63 227 aaKnown RBP16.26■□□□□ 0.19
PTBP1-204ENST00000394601 POLIQ9UNA4 740 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 RPS6KL1Q9Y6S9 549 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 UNC5CO95185 931 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 PRKCBP05771 671 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 ITGAVP06756 1048 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 SRGAP2CP0DJJ0 459 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 KRT15P19012 456 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 FOXN2P32314 431 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 VCPP55072 806 aaKnown RBP16.26■□□□□ 0.19
PTBP1-204ENST00000394601 WDR4P57081 412 aaKnown RBP16.26■□□□□ 0.19
PTBP1-204ENST00000394601 TFDP3Q5H9I0 405 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 EEF1DP3Q658K8 133 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 DSTYKQ6XUX3 929 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 ZNF365Q70YC5 407 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 EEPD1Q7L9B9 569 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 RNF149Q8NC42 400 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 BBOF1Q8ND07 529 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 JOSD2Q8TAC2 188 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 TXNRD2Q9NNW7 524 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 NPHS2Q9NP85 383 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 UBN1Q9NPG3 1134 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 GRID1Q9ULK0 1009 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 CREB3O43889 395 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 CDH16O75309 829 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 MARK3P27448 753 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 GAD2Q05329 585 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 MOGSQ13724 837 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 FAM182AQ5T1J6 154 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 CCDC62Q6P9F0 684 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 CEP128Q6ZU80 1094 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 TDRPQ86YL5 185 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 NMD3Q96D46 503 aaKnown RBP16.26■□□□□ 0.19
PTBP1-204ENST00000394601 DNAJC1Q96KC8 554 aaKnown RBP16.26■□□□□ 0.19
PTBP1-204ENST00000394601 WDR35Q9P2L0 1181 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 CHMP2BQ9UQN3 213 aa16.26■□□□□ 0.19
PTBP1-204ENST00000394601 DNAJC25-GNG10A0A024R161 153 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 GOLGA8RI6L899 631 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 LRCH4O75427 683 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 KRT1P04264 644 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 ATP6V1C1P21283 382 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 GDF10P55107 478 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 TMEM62Q0P6H9 643 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 STAT4Q14765 748 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 CELF3Q5SZQ8 465 aaKnown RBP16.25■□□□□ 0.19
PTBP1-204ENST00000394601 FAM160B1Q5W0V3 765 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 TRAPPC12Q8WVT3 735 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 KLF6Q99612 283 aaPredicted RBP16.25■□□□□ 0.19
PTBP1-204ENST00000394601 FOXP3Q9BZS1 431 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 LHX5Q9H2C1 402 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms