RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 STRCQ7RTU9 1775 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 A6NJR5 290 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 TRIM49D1C9J1S8 452 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 ZC3H11AO75152 810 aaKnown RBP eCLIP17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 HOXA10P31260 410 aaPredicted RBP17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 IRX4P78413 519 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 SP4Q02446 784 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 C1QBPQ07021 282 aaKnown RBP17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 USP4Q13107 963 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 LPCAT4Q643R3 524 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 TRIM72Q6ZMU5 477 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 MYLK4Q86YV6 388 aaPredicted RBP17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 ST13P4Q8IZP2 240 aaPredicted RBP17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 CHURC1Q8WUH1 139 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 OPTNQ96CV9 577 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 VCPIP1Q96JH7 1222 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 IDI2Q9BXS1 227 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 TAGLN3Q9UI15 199 aa17.15■□□□□ 0.34
EFEMP1-202ENST00000394555 CAPN14A8MX76 684 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 TXNDC9O14530 226 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 SPATA31D3P0C874 917 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 CCNFP41002 786 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 CHI3L2Q15782 390 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 ZC3H12AQ5D1E8 599 aaKnown RBP17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 SPATA31D4Q6ZUB0 917 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 ZNF606Q8WXB4 792 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 CEP170P1Q96L14 293 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 CCPG1Q9ULG6 757 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 EPHB1P54762 984 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 NLRP11P59045 1033 aaKnown RBP17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 SLC25A3Q00325 362 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 SESTD1Q86VW0 696 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 PPP2R3CQ969Q6 453 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 AZIN2Q96A70 460 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 CCDC124Q96CT7 223 aaKnown RBP17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 FETUBQ9UGM5 382 aa17.14■□□□□ 0.33
EFEMP1-202ENST00000394555 CREB3O43889 395 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 HARSP12081 509 aaKnown RBP17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 MMP8P22894 467 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 ZACNQ401N2 412 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 ZCCHC23Q6ZST2 131 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 ANO5Q75V66 913 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 MARK2Q7KZI7 788 aaKnown RBP17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 SLC26A7Q8TE54 656 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 USP6NLQ92738 828 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 SHCBP1LQ9BZQ2 653 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 KCNK4Q9NYG8 393 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 PLA2G4CQ9UP65 541 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 NUB1Q9Y5A7 615 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 STK10O94804 968 aaKnown RBP17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 VNN1O95497 513 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 CD48P09326 243 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 CRABP2P29373 138 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 LIG4P49917 911 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 MRPS9P82933 396 aaKnown RBP17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 BMPR2Q13873 1038 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 SEZ6Q53EL9 994 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 POU5F2Q8N7G0 328 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 E2F7Q96AV8 911 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 NMD3Q96D46 503 aaKnown RBP17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 NFASCO94856 1347 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 WEE2P0C1S8 567 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 ASPHQ12797 758 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 CES4AQ5XG92 561 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 EBF4Q9BQW3 602 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 WWP1Q9H0M0 922 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 PCSK1NQ9UHG2 260 aa17.13■□□□□ 0.33
EFEMP1-202ENST00000394555 SIPA1L1O43166 1804 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 SORBS2O94875 1100 aaKnown RBP17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 C15orf39Q6ZRI6 1047 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 NUDCD3Q8IVD9 361 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 C4orf19Q8IY42 314 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 OR6Y1Q8NGX8 325 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 SLC44A1Q8WWI5 657 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 CNTN3Q9P232 1028 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 NDC80O14777 642 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 CCNE2O96020 404 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 C4BPAP04003 597 aaKnown RBP17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 C6orf222P0C671 652 aaPredicted RBP17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 PDE1BQ01064 536 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 MED21Q13503 144 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 DNAL1Q4LDG9 190 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 SFT2D3Q587I9 215 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 CLIC5Q9NZA1 410 aa17.12■□□□□ 0.33
EFEMP1-202ENST00000394555 TESPA1A2RU30 521 aaPredicted RBP17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 TCP10L2B9ZVM9 353 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 PDE5AO76074 875 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 OR6B1O95007 311 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 SLC18A2Q05940 514 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 ZBTB41Q5SVQ8 909 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 SATL1Q86VE3 508 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 RFX6Q8HWS3 928 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 EFCAB3Q8N7B9 438 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 ZBTB45Q96K62 511 aaPredicted RBP17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 SLC9A2Q9UBY0 812 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 PSMA2P25787 234 aa17.11■□□□□ 0.33
EFEMP1-202ENST00000394555 HIC1Q14526 733 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms