RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 SENP8Q96LD8 212 aa23.32■■□□□ 1.32
HMGA2-203ENST00000393578 TRPV6Q9H1D0 765 aa23.32■■□□□ 1.32
HMGA2-203ENST00000393578 R3HDM2Q9Y2K5 976 aaKnown RBP23.32■■□□□ 1.32
HMGA2-203ENST00000393578 LRRD1A4D1F6 860 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 AGPSO00116 658 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 HSF2BPO75031 334 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 GGCXP38435 758 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 ATL2Q8NHH9 583 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 RXFP2Q8WXD0 754 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 STARD7Q9NQZ5 370 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 ZDHHC18Q9NUE0 388 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 CACNG4Q9UBN1 327 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 SNX24Q9Y343 169 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 PAPSS1O43252 624 aaPredicted RBP23.31■■□□□ 1.32
HMGA2-203ENST00000393578 GABBR2O75899 941 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 IL1R2P27930 398 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 CDKN2BP42772 138 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 PPP1R7Q15435 360 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 UPP1Q16831 310 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 SCUBE3Q8IX30 993 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 RNF169Q8NCN4 708 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 HNRNPABQ99729 332 aaKnown RBP23.31■■□□□ 1.32
HMGA2-203ENST00000393578 ZWILCHQ9H900 591 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 EFR3BQ9Y2G0 817 aa23.31■■□□□ 1.32
HMGA2-203ENST00000393578 FRMPD3Q5JV73 1810 aa23.3■■□□□ 1.32
HMGA2-203ENST00000393578 hCG_1818297A0A087WSY0 165 aa23.3■■□□□ 1.32
HMGA2-203ENST00000393578 SYF2O95926 243 aaKnown RBP23.3■■□□□ 1.32
HMGA2-203ENST00000393578 KRT10P13645 584 aa23.3■■□□□ 1.32
HMGA2-203ENST00000393578 IGFBP6P24592 240 aaPredicted RBP23.3■■□□□ 1.32
HMGA2-203ENST00000393578 MIPP30301 263 aa23.3■■□□□ 1.32
HMGA2-203ENST00000393578 ACADSBP45954 432 aa23.3■■□□□ 1.32
HMGA2-203ENST00000393578 RPL21P46778 160 aaKnown RBP23.3■■□□□ 1.32
HMGA2-203ENST00000393578 IQCKQ8N0W5 287 aa23.3■■□□□ 1.32
HMGA2-203ENST00000393578 FMO2Q99518 471 aa23.3■■□□□ 1.32
HMGA2-203ENST00000393578 SAGE1Q9NXZ1 904 aa23.3■■□□□ 1.32
HMGA2-203ENST00000393578 GRHL1Q9NZI5 618 aa23.3■■□□□ 1.32
HMGA2-203ENST00000393578 C3orf70A6NLC5 250 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-203ENST00000393578 DPYSL4O14531 572 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 GAS8O95995 478 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 PTPN1P18031 435 aaKnown RBP23.29■■□□□ 1.32
HMGA2-203ENST00000393578 FLT3P36888 993 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 LHX1P48742 406 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 TRNP1Q6NT89 227 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 ZNF784Q8NCA9 323 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-203ENST00000393578 ACSF2Q96CM8 615 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-203ENST00000393578 HSFY1Q96LI6 401 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 FAM129AQ9BZQ8 928 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 USP18Q9UMW8 372 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 POLR3GO15318 223 aaPredicted RBP23.29■■□□□ 1.32
HMGA2-203ENST00000393578 SCNN1AP37088 669 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 KRT17Q04695 432 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 ADCY2Q08462 1091 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 SMTNL2Q2TAL5 461 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 CFAP58Q5T655 872 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 KAZNQ674X7 775 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 TRAF7Q6Q0C0 670 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 C3orf58Q8NDZ4 430 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 KHSRPQ92945 711 aaKnown RBP eCLIP23.29■■□□□ 1.322e-7■■■□□ 15.9
HMGA2-203ENST00000393578 ZBTB9Q96C00 473 aa23.29■■□□□ 1.32
HMGA2-203ENST00000393578 CASTOR2A6NHX0 329 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 GRAP2O75791 330 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 TRUB2O95900 331 aaKnown RBP23.28■■□□□ 1.32
HMGA2-203ENST00000393578 TKTP29401 623 aaKnown RBP23.28■■□□□ 1.32
HMGA2-203ENST00000393578 SLC8A3P57103 927 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 FAM193AP78312 1265 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 GRIK3Q13003 919 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 TAZQ16635 292 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 KCNT1Q5JUK3 1230 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 ZDHHC24Q6UX98 284 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 DSTYKQ6XUX3 929 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 ZNF598Q86UK7 904 aaKnown RBP23.28■■□□□ 1.32
HMGA2-203ENST00000393578 ECHDC2Q86YB7 292 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 FUKQ8N0W3 1084 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 CMASQ8NFW8 434 aaPredicted RBP23.28■■□□□ 1.32
HMGA2-203ENST00000393578 DUSP16Q9BY84 665 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 DDX43Q9NXZ2 648 aaKnown RBP23.28■■□□□ 1.32
HMGA2-203ENST00000393578 PCSK1NQ9UHG2 260 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 PHF24Q9UPV7 400 aa23.28■■□□□ 1.32
HMGA2-203ENST00000393578 XPO1O14980 1071 aaKnown RBP23.27■■□□□ 1.32
HMGA2-203ENST00000393578 ATP2C2O75185 946 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 POMCP01189 267 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 KDELR1P24390 212 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 PLTPP55058 493 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 HTRA3P83110 453 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 GABPB1Q06547 395 aaPredicted RBP23.27■■□□□ 1.32
HMGA2-203ENST00000393578 PTK6Q13882 451 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 TAF5Q15542 800 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 CCDC14Q49A88 953 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 DRICH1Q6PGQ1 229 aaPredicted RBP23.27■■□□□ 1.32
HMGA2-203ENST00000393578 ARCQ7LC44 396 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 TMC3Q7Z5M5 1100 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 RUFY1Q96T51 708 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 B3GNT5Q9BYG0 378 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 RGS18Q9NS28 235 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 ARVCFO00192 962 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 DESP17661 470 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 ACAT1P24752 427 aaKnown RBP23.27■■□□□ 1.32
HMGA2-203ENST00000393578 LMNB2Q03252 620 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 MTMR3Q13615 1198 aa23.27■■□□□ 1.32
HMGA2-203ENST00000393578 SLC26A9Q7LBE3 791 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms