RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 AP1ARQ63HQ0 302 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 ADGRD1Q6QNK2 874 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 PHF13Q86YI8 300 aaPredicted RBP18.84■□□□□ 0.61
ERCC2-201ENST00000391941 NAT8LQ8N9F0 302 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 ATP11CQ8NB49 1132 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 MSTO1Q9BUK6 570 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.84■□□□□ 0.61
ERCC2-201ENST00000391941 SLC17A6Q9P2U8 582 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 CYTH4Q9UIA0 394 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 EXTL3O43909 919 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 C11orf91Q3C1V1 193 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 RBM15BQ8NDT2 890 aaKnown RBP18.84■□□□□ 0.61
ERCC2-201ENST00000391941 TLE6Q9H808 572 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 PIH1D1Q9NWS0 290 aaKnown RBP18.84■□□□□ 0.61
ERCC2-201ENST00000391941 TMOD2Q9NZR1 351 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 LNPEPQ9UIQ6 1025 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 DOCK5Q9H7D0 1870 aa18.84■□□□□ 0.61
ERCC2-201ENST00000391941 SPDYE2BA6NHP3 402 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 PLA2G6O60733 806 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 SPDYE6P0CI01 402 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 CD19P15391 556 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 SERPINB4P48594 390 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 CDK16Q00536 496 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 SLC34A1Q06495 639 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 DENND1BQ6P3S1 775 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 DRICH1Q6PGQ1 229 aaPredicted RBP18.83■□□□□ 0.61
ERCC2-201ENST00000391941 SLC35B2Q8TB61 432 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 RNF217Q8TC41 542 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 SH3TC2Q8TF17 1288 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 OXNAD1Q96HP4 312 aaPredicted RBP18.83■□□□□ 0.61
ERCC2-201ENST00000391941 EBF4Q9BQW3 602 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 ACSS3Q9H6R3 686 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 PCDH9Q9HC56 1237 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 NXF1Q9UBU9 619 aaKnown RBP18.83■□□□□ 0.61
ERCC2-201ENST00000391941 PCDHA10Q9Y5I2 948 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 CNTNAP1P78357 1384 aa18.83■□□□□ 0.61
ERCC2-201ENST00000391941 C3orf70A6NLC5 250 aaPredicted RBP18.83■□□□□ 0.6
ERCC2-201ENST00000391941 GARTP22102 1010 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 CDH8P55286 799 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 FSTL1Q12841 308 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 SPDYE2Q495Y8 402 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 RFX6Q8HWS3 928 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 SAMD3Q8N6K7 520 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 POU5F2Q8N7G0 328 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 NETO2Q8NC67 525 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 FBXO41Q8TF61 875 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 SH3GL3Q99963 347 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 PXMP2Q9NR77 195 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 PPM1HQ9ULR3 514 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 SHOC2Q9UQ13 582 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 SNCAIPQ9Y6H5 919 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 GRAP2O75791 330 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 STBD1O95210 358 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 JAK3P52333 1124 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 C1QBPQ07021 282 aaKnown RBP18.83■□□□□ 0.6
ERCC2-201ENST00000391941 C1orf228Q6PIY5 440 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 PPIL6Q8IXY8 311 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 VCPIP1Q96JH7 1222 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 SMYD3Q9H7B4 428 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 PACSIN3Q9UKS6 424 aa18.83■□□□□ 0.6
ERCC2-201ENST00000391941 NFASCO94856 1347 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 THSD7AQ9UPZ6 1657 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 TRIM49D1C9J1S8 452 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 LRCH4O75427 683 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 RGS20O76081 388 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 PSMD6Q15008 389 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 IZUMO2Q6UXV1 221 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 TRIM72Q6ZMU5 477 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 CFAP61Q8NHU2 1237 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 TCHPQ9BT92 498 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 SAR1AQ9NR31 198 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 SLC9A2Q9UBY0 812 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 POLIQ9UNA4 740 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 STK10O94804 968 aaKnown RBP18.82■□□□□ 0.6
ERCC2-201ENST00000391941 RAB27AP51159 221 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 PRKD1Q15139 912 aaPredicted RBP18.82■□□□□ 0.6
ERCC2-201ENST00000391941 DLGAP5Q15398 846 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 CDO1Q16878 200 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 CCDC62Q6P9F0 684 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 ASCC2Q9H1I8 757 aaPredicted RBP18.82■□□□□ 0.6
ERCC2-201ENST00000391941 CYP26B1Q9NR63 512 aa18.82■□□□□ 0.6
ERCC2-201ENST00000391941 DRG1Q9Y295 367 aaKnown RBP18.82■□□□□ 0.6
ERCC2-201ENST00000391941 ITGAVP06756 1048 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 FESP07332 822 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 ETV4P43268 484 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 PTPN20Q4JDL3 420 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 UNC5BQ8IZJ1 945 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 PANX3Q96QZ0 392 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 TUBGCP5Q96RT8 1024 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 ASB3Q9Y575 518 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 IKBKGQ9Y6K9 419 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 SNUPNO95149 360 aaKnown RBP18.81■□□□□ 0.6
ERCC2-201ENST00000391941 INHBAP08476 426 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 EIF3EP60228 445 aaKnown RBP18.81■□□□□ 0.6
ERCC2-201ENST00000391941 BST1Q10588 318 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 RIPOR1Q6ZS17 1223 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 MCF2L2Q86YR7 1114 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 PYDC1Q8WXC3 89 aa18.81■□□□□ 0.6
ERCC2-201ENST00000391941 CCDC124Q96CT7 223 aaKnown RBP18.81■□□□□ 0.6
ERCC2-201ENST00000391941 GJD4Q96KN9 370 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms