RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 CPSF3Q9UKF6 684 aaKnown RBP10.36□□□□□ -0.75
IFT88-203ENST00000389373 NOL7Q9UMY1 257 aaKnown RBP10.36□□□□□ -0.75
IFT88-203ENST00000389373 ARHGAP26Q9UNA1 814 aa10.36□□□□□ -0.75
IFT88-203ENST00000389373 CYP8B1Q9UNU6 501 aa10.36□□□□□ -0.75
IFT88-203ENST00000389373 DMXL2Q8TDJ6 3036 aa10.36□□□□□ -0.75
IFT88-203ENST00000389373 TBC1D3BA6NDS4 549 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 FAM189A1O60320 539 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 HUS1O60921 280 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 NDUFS2O75306 463 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 GABRG2P18507 467 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 MAOBP27338 520 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 GRIA2P42262 883 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 TNFRSF4P43489 277 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 KIR2DL1P43626 348 aaPredicted RBP10.35□□□□□ -0.75
IFT88-203ENST00000389373 NCKAP1LP55160 1127 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 ZXDBP98169 803 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 MYL7Q01449 175 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 SLC14A1Q13336 389 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 CCDC142Q17RM4 750 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 PDCL2Q8N4E4 241 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 IGSF22Q8N9C0 903 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 SYT2Q8N9I0 419 aaPredicted RBP10.35□□□□□ -0.75
IFT88-203ENST00000389373 C8orf76Q96K31 380 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 MYRFLQ96LU7 910 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 CALCOCO1Q9P1Z2 691 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 DERAQ9Y315 318 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 MYO16Q9Y6X6 1858 aa10.35□□□□□ -0.75
IFT88-203ENST00000389373 ANKRD11Q6UB99 2663 aaPredicted RBP10.35□□□□□ -0.75
IFT88-203ENST00000389373 NBEAQ8NFP9 2946 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 A0A0B4J269 797 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 IGHV1OR15-9A0A0B4J2B8 117 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 A0A1W2PQD8 194 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 TRABD2BA6NFA1 517 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 K7ENM7 598 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 SLC9A3R1O14745 358 aaPredicted RBP10.34□□□□□ -0.75
IFT88-203ENST00000389373 EPB41L2O43491 1005 aaKnown RBP10.34□□□□□ -0.75
IFT88-203ENST00000389373 PLA2G4BP0C869 781 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 ADH5P11766 374 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 HOXB2P14652 356 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 GNSP15586 552 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 TCF3P15923 654 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 PDE6CP51160 858 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 DHX8Q14562 1220 aaKnown RBP10.34□□□□□ -0.75
IFT88-203ENST00000389373 CCDC157Q569K6 752 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 INTS6LQ5JSJ4 861 aaKnown RBP10.34□□□□□ -0.75
IFT88-203ENST00000389373 SYCP2LQ5T4T6 812 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 ADALQ6DHV7 355 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 RHBDF2Q6PJF5 856 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 MYCT1Q8N699 235 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 ZNF513Q8N8E2 541 aaPredicted RBP10.34□□□□□ -0.75
IFT88-203ENST00000389373 PIP4K2CQ8TBX8 421 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 LEO1Q8WVC0 666 aaPredicted RBP10.34□□□□□ -0.75
IFT88-203ENST00000389373 SLC39A7Q92504 469 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 CDK5RAP3Q96JB5 506 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 ZNF560Q96MR9 790 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 ACBD6Q9BR61 282 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 FOXP1Q9H334 677 aaPredicted RBP10.34□□□□□ -0.75
IFT88-203ENST00000389373 ZHX3Q9H4I2 956 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 ASB7Q9H672 318 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 PRDM16Q9HAZ2 1276 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 TRPM5Q9NZQ8 1165 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 CFAP97Q9P2B7 532 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 L1RE1Q9UN81 338 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 AGAP1Q9UPQ3 857 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 CPQQ9Y646 472 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 KIAA1549LQ6ZVL6 1849 aa10.34□□□□□ -0.75
IFT88-203ENST00000389373 FAM149AA5PLN7 773 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 ANKRD63C9JTQ0 380 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 HCRTO43612 131 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 ZNF217O75362 1048 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 GJB3O75712 270 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 FAM13AO94988 1023 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 ADH1CP00326 375 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 POLR2BP30876 1174 aaKnown RBP10.33□□□□□ -0.76
IFT88-203ENST00000389373 GRIK1P39086 918 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 ABCG1P45844 678 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 GRIK2Q13002 908 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 IL17AQ16552 155 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 BTBD8Q5XKL5 378 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 SDE2Q6IQ49 451 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 SLC39A4Q6P5W5 647 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 DTHD1Q6ZMT9 781 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 TRMT11Q7Z4G4 463 aaKnown RBP10.33□□□□□ -0.76
IFT88-203ENST00000389373 OSTM1Q86WC4 334 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 UBL7Q96S82 380 aaPredicted RBP10.33□□□□□ -0.76
IFT88-203ENST00000389373 MMTAG2Q9BU76 263 aaKnown RBP10.33□□□□□ -0.76
IFT88-203ENST00000389373 CCSER1Q9C0I3 900 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 RNF38Q9H0F5 515 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 MIR1-1HGQ9H1L0 117 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 FAM124BQ9H5Z6 455 aaPredicted RBP10.33□□□□□ -0.76
IFT88-203ENST00000389373 ABCB6Q9NP58 842 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 CD93Q9NPY3 652 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 CACNA2D2Q9NY47 1150 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 MAGEC2Q9UBF1 373 aaPredicted RBP10.33□□□□□ -0.76
IFT88-203ENST00000389373 SUSD2Q9UGT4 822 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 AGO2Q9UKV8 859 aaKnown RBP10.33□□□□□ -0.76
IFT88-203ENST00000389373 PCOLCE2Q9UKZ9 415 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 C2CD2Q9Y426 696 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 PCDHB6Q9Y5E3 794 aa10.33□□□□□ -0.76
IFT88-203ENST00000389373 ANK1P16157 1881 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms