RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 SPC25Q9HBM1 224 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.68□□□□□ -0.7
LTN1-203ENST00000389195 ATP8B3O60423 1300 aa10.68□□□□□ -0.7
LTN1-203ENST00000389195 B3GAT3O94766 335 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 ECEL1O95672 775 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 LSM8O95777 96 aaKnown RBP10.67□□□□□ -0.7
LTN1-203ENST00000389195 AMHP03971 560 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 PAEPP09466 180 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 OR4Q2P0C623 313 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 GNAT1P11488 350 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 ATICP31939 592 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 CHRNA3P32297 505 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 GATMP50440 423 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 ATN1P54259 1190 aaPredicted RBP10.67□□□□□ -0.7
LTN1-203ENST00000389195 MAP3K7CLP57077 242 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 NNTQ13423 1086 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 SLC29A2Q14542 456 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 MBTPS1Q14703 1052 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 CCDC14Q49A88 953 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 MDH1BQ5I0G3 518 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 SPOCD1Q6ZMY3 1216 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 HFE2Q6ZVN8 426 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 SERINC5Q86VE9 423 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 KCTD6Q8NC69 237 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 FAM149B1Q96BN6 582 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 VCPIP1Q96JH7 1222 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 RUFY1Q96T51 708 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 NAP1L3Q99457 506 aaPredicted RBP10.67□□□□□ -0.7
LTN1-203ENST00000389195 EPB41L4BQ9H329 900 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 SNX25Q9H3E2 840 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 USP18Q9UMW8 372 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 UBQLN1Q9UMX0 589 aaKnown RBP10.67□□□□□ -0.7
LTN1-203ENST00000389195 SCN10AQ9Y5Y9 1956 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 GOLGA6CA6NDK9 693 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 GOLGA6DP0CG33 693 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 CDH5P33151 784 aaPredicted RBP10.67□□□□□ -0.7
LTN1-203ENST00000389195 CDKN2BP42772 138 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 SLC1A1P43005 524 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 VEGFBP49765 207 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 ITGA8P53708 1063 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 LPIN1Q14693 890 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 LCLAT1Q6UWP7 414 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 GPRIN1Q7Z2K8 1008 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 SLC35F5Q8WV83 523 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 LHX5Q9H2C1 402 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 GOLGA6AQ9NYA3 693 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 HEY1Q9Y5J3 304 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 TRPV2Q9Y5S1 764 aa10.67□□□□□ -0.7
LTN1-203ENST00000389195 C3orf70A6NLC5 250 aaPredicted RBP10.66□□□□□ -0.7
LTN1-203ENST00000389195 ANKRD65E5RJM6 399 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 HUS1O60921 280 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 TUBBP07437 444 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 HOXC8P31273 242 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 TAF6P49848 677 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 ACLYP53396 1101 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 ZNF844Q08AG5 666 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 ADIGQ0VDE8 80 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 NOGQ13253 232 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 SMAD1Q15797 465 aaKnown RBP10.66□□□□□ -0.7
LTN1-203ENST00000389195 RTN4RL1Q86UN2 441 aaPredicted RBP10.66□□□□□ -0.7
LTN1-203ENST00000389195 ZNF280BQ86YH2 543 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 FUKQ8N0W3 1084 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 GOLGA6L1Q8N7Z2 621 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 ACTL9Q8TC94 416 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 C9orf72Q96LT7 481 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 VRTNQ9H8Y1 702 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 PLEKHA5Q9HAU0 1116 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 AAASQ9NRG9 546 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 CTNNAL1Q9UBT7 734 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 PCYOX1Q9UHG3 505 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 NUDT5Q9UKK9 219 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 MYO18AQ92614 2054 aaKnown RBP10.66□□□□□ -0.7
LTN1-203ENST00000389195 SPTBN5Q9NRC6 3674 aaKnown RBP10.66□□□□□ -0.7
LTN1-203ENST00000389195 H0YGN5 161 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 HMGCRP04035 888 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 IVDP26440 423 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 CDH6P55285 790 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 OTUD4Q01804 1114 aaKnown RBP10.66□□□□□ -0.7
LTN1-203ENST00000389195 GUCY1A3Q02108 690 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 GPS2Q13227 327 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 FASTKD3Q14CZ7 662 aaKnown RBP10.66□□□□□ -0.7
LTN1-203ENST00000389195 KYNUQ16719 465 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 P3H1Q32P28 736 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 TIGD5Q53EQ6 642 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 CCSAPQ6IQ19 270 aaPredicted RBP10.66□□□□□ -0.7
LTN1-203ENST00000389195 PAQR9Q6ZVX9 377 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 CYP4V2Q6ZWL3 525 aaPredicted RBP10.66□□□□□ -0.7
LTN1-203ENST00000389195 FAM131BQ86XD5 332 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 KATNAL2Q8IYT4 538 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 EPS8L3Q8TE67 593 aaKnown RBP10.66□□□□□ -0.7
LTN1-203ENST00000389195 FAM172AQ8WUF8 416 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 SENP8Q96LD8 212 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 PPP1R10Q96QC0 940 aaKnown RBP10.66□□□□□ -0.7
LTN1-203ENST00000389195 MED10Q9BTT4 135 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 LRRC19Q9H756 370 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 CYP3A43Q9HB55 503 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 DDX43Q9NXZ2 648 aaKnown RBP10.66□□□□□ -0.7
LTN1-203ENST00000389195 NFS1Q9Y697 457 aa10.66□□□□□ -0.7
LTN1-203ENST00000389195 C2CD4BA6NLJ0 364 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 SGK1O00141 431 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms