RNA–Protein interactions for RNA: ENST00000387416.2

MT-TS1-201, Transcript of mitochondrially encoded tRNA serine 1 (UCN), humanhuman

BASIC

Gene MT-TS1, Length 69 nt, Biotype Mt tRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-TS1-201ENST00000387416 NUP93Q8N1F7 819 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 TMEM105Q8N8V8 129 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 MAB21L3Q8N8X9 362 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 MLKLQ8NB16 471 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 DTWD2Q8NBA8 298 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 STKLD1Q8NE28 680 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 NELFBQ8WX92 580 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 ERCC4Q92889 916 aaPredicted RBP9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 GBP4Q96PP9 640 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 HNRNPABQ99729 332 aaKnown RBP9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 MED10Q9BTT4 135 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 FBXO44Q9H4M3 255 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 IL37Q9NZH6 218 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 KIAA1257Q9ULG3 409 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 NCANO14594 1321 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 MYH10P35580 1976 aa9.03□□□□□ -0.96
MT-TS1-201ENST00000387416 KMT2EQ8IZD2 1858 aa9.02□□□□□ -0.96
MT-TS1-201ENST00000387416 GREB1Q4ZG55 1949 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 ZNF840PA6NDX5 716 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 FAM170BA6NMN3 283 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 HCRTO43612 131 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 AP1G2O75843 785 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 CKMP06732 381 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 CCDC192P0DO97 292 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 CD44P16070 742 aaKnown RBP9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 HDCP19113 662 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 GPR15P49685 360 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 PMS1P54277 932 aaKnown RBP9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 MARSP56192 900 aaKnown RBP9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 SLC8A3P57103 927 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 NR1H3Q13133 447 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 GRM2Q14416 872 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 UBXN2BQ14CS0 331 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 PDGFRLQ15198 375 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 ITPRIPL2Q3MIP1 535 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 DCAF17Q5H9S7 520 aaPredicted RBP9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 STXBP5Q5T5C0 1151 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 IER5LQ5T953 404 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 SDHAF4Q5VUM1 108 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 TXNDC8Q6A555 127 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 ISM2Q6H9L7 571 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 KLHL10Q6JEL2 608 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 TTI2Q6NXR4 508 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 FAM35AQ86V20 835 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 RALGPS2Q86X27 583 aaPredicted RBP9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 DDX42Q86XP3 938 aaKnown RBP eCLIP9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 FUKQ8N0W3 1084 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 PJA1Q8NG27 643 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 SLC35C1Q96A29 364 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 CLDN23Q96B33 292 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 CYFIP2Q96F07 1278 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 UBXN6Q9BZV1 441 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 ZNF518BQ9C0D4 1074 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 SDCBP2Q9H190 292 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 DPEP3Q9H4B8 488 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 CLSTN2Q9H4D0 955 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 MMRN2Q9H8L6 949 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 APOBEC3GQ9HC16 384 aaKnown RBP9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 CSNK1G1Q9HCP0 422 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 PNPLA8Q9NP80 782 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 LTB4R2Q9NPC1 389 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 RAPGEFL1Q9UHV5 662 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 DACH1Q9UI36 760 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 RWDD2AQ9UIY3 292 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 NME7Q9Y5B8 376 aa9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 EP300Q09472 2414 aaPredicted RBP9.02□□□□□ -0.97
MT-TS1-201ENST00000387416 WDR87Q6ZQQ6 2873 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 FAM92AA1XBS5 289 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 TRIM49BA6NDI0 452 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 ARNTLO00327 626 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 BIN1O00499 593 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 NRG2O14511 850 aaPredicted RBP9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 SLC9A3R1O14745 358 aaPredicted RBP9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 PI15O43692 258 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 FAM200BP0CF97 657 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 BMP6P22004 513 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 RAP1GAPP47736 663 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 FMO5P49326 533 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 PSEN1P49768 467 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 TUBP50607 506 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 CDR1P51861 262 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 KPNA1P52294 538 aaPredicted RBP9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 SLC7A9P82251 487 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 NHLH1Q02575 133 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 TCF15Q12870 199 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 TAF10Q12962 218 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 LRRC32Q14392 662 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 CAMK4Q16566 473 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 CCDC142Q17RM4 750 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 DGKKQ5KSL6 1271 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 SNX30Q5VWJ9 437 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 SPOPLQ6IQ16 392 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 TPRG1Q6ZUI0 275 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 PAQR9Q6ZVX9 377 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 SYNPOQ8N3V7 929 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 PRSS33Q8NF86 280 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 ST13P5Q8NFI4 369 aaPredicted RBP9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 CCDC26Q8TAB7 109 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 SLC2A14Q8TDB8 520 aa9.01□□□□□ -0.97
MT-TS1-201ENST00000387416 SEMA4DQ92854 862 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms