RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 NTPCRQ9BSD7 190 aaKnown RBP14.48□□□□□ -0.09
SDC1-202ENST00000381150 ZNF212Q9UDV6 495 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 NOCTQ9UK39 431 aaKnown RBP14.48□□□□□ -0.09
SDC1-202ENST00000381150 ZNF711Q9Y462 761 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 KAT6AQ92794 2004 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 DOCK5Q9H7D0 1870 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 WDR64B1ANS9 1081 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 FDX1P10109 184 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 SFNP31947 248 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 GMPSP49915 693 aaPredicted RBP14.48□□□□□ -0.09
SDC1-202ENST00000381150 GEMIN4P57678 1058 aaKnown RBP14.48□□□□□ -0.09
SDC1-202ENST00000381150 CDK16Q00536 496 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 CDC16Q13042 620 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 ZNF394Q53GI3 561 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 ZCCHC23Q6ZST2 131 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 ZCCHC9Q8N567 271 aaKnown RBP14.48□□□□□ -0.09
SDC1-202ENST00000381150 MORC4Q8TE76 937 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 ACTL7BQ9Y614 415 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 ARID2Q68CP9 1835 aa14.48□□□□□ -0.09
SDC1-202ENST00000381150 ZNF862O60290 1169 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 INHBAP08476 426 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 GZMAP12544 262 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 KRT76Q01546 638 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 MMADHCQ9H3L0 296 aaPredicted RBP14.47□□□□□ -0.09
SDC1-202ENST00000381150 PDLIM7Q9NR12 457 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 ATP6V1G1O75348 118 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 CYP1A2P05177 515 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 PTPRAP18433 802 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 SP4Q02446 784 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 UBAP2LQ14157 1087 aaKnown RBP14.47□□□□□ -0.09
SDC1-202ENST00000381150 CTC1Q2NKJ3 1217 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 FAM102BQ5T8I3 360 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 ARHGEF16Q5VV41 709 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 DCUN1D2Q6PH85 259 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 MARK2Q7KZI7 788 aaKnown RBP14.47□□□□□ -0.09
SDC1-202ENST00000381150 RHOT1Q8IXI2 618 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 FBXO36Q8NEA4 188 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.47□□□□□ -0.091e-7■■□□□ 12.2
SDC1-202ENST00000381150 BSNDQ8WZ55 320 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 TTC25Q96NG3 672 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 GCNAQ96QF7 691 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 ZNF214Q9UL59 606 aaPredicted RBP14.47□□□□□ -0.09
SDC1-202ENST00000381150 TESPA1A2RU30 521 aaPredicted RBP14.47□□□□□ -0.09
SDC1-202ENST00000381150 SORBS2O94875 1100 aaKnown RBP14.47□□□□□ -0.09
SDC1-202ENST00000381150 NR3C2P08235 984 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 NPTX2P47972 431 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 PEX6Q13608 980 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 TCEAL1Q15170 157 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 XKR9Q5GH70 373 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 SPOPLQ6IQ16 392 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 XRRA1Q6P2D8 792 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 SLC39A4Q6P5W5 647 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 C12orf50Q8NA57 414 aaPredicted RBP14.47□□□□□ -0.09
SDC1-202ENST00000381150 CFAP36Q96G28 342 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 RNF146Q9NTX7 359 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 TBX20Q9UMR3 447 aa14.47□□□□□ -0.09
SDC1-202ENST00000381150 MYOCOSA0A1B0GUC4 107 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 PRPF4O43172 522 aaKnown RBP eCLIP14.46□□□□□ -0.092e-7■■□□□ 13.9
SDC1-202ENST00000381150 FAM155BO75949 473 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 KCNA2P16389 499 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 BAG6P46379 1132 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 AQP5P55064 265 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 HADHBP55084 474 aaKnown RBP14.46□□□□□ -0.09
SDC1-202ENST00000381150 INHBCP55103 352 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 ACAP1Q15027 740 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 TCHHL1Q5QJ38 904 aaPredicted RBP14.46□□□□□ -0.09
SDC1-202ENST00000381150 ACBD5Q5T8D3 534 aaPredicted RBP14.46□□□□□ -0.09
SDC1-202ENST00000381150 IYDQ6PHW0 289 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 MFSD7Q6UXD7 560 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 TREML1Q86YW5 311 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 MAP4K3Q8IVH8 894 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 APLFQ8IW19 511 aaPredicted RBP14.46□□□□□ -0.09
SDC1-202ENST00000381150 PPM1NQ8N819 430 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 RDM1Q8NG50 284 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 PANX3Q96QZ0 392 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 FAM192AQ9GZU8 254 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 ZWILCHQ9H900 591 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 ATXN10Q9UBB4 475 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 FZD1Q9UP38 647 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 LCTP09848 1927 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 FZD9O00144 591 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 DNAJC6O75061 913 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 CFHP08603 1231 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 VAV1P15498 845 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 PHBP35232 272 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 NFX1Q12986 1120 aaKnown RBP14.46□□□□□ -0.09
SDC1-202ENST00000381150 CCNG2Q16589 344 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 KCNT1Q5JUK3 1230 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 SYDE1Q6ZW31 735 aaPredicted RBP14.46□□□□□ -0.09
SDC1-202ENST00000381150 FAM71AQ8IYT1 594 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 ULK2Q8IYT8 1036 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 ARHGAP18Q8N392 663 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 NME8Q8N427 588 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 GPRASP2Q96D09 838 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 C12orf42Q96LP6 360 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 FBXL18Q96ME1 805 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 SENP1Q9P0U3 644 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 APPL1Q9UKG1 709 aa14.46□□□□□ -0.09
SDC1-202ENST00000381150 MTO1Q9Y2Z2 717 aaKnown RBP14.46□□□□□ -0.09
SDC1-202ENST00000381150 PCDHA10Q9Y5I2 948 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms