RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 DUSP16Q9BY84 665 aa21.16■□□□□ 0.98
CDPF1-202ENST00000381037 CD320Q9NPF0 282 aa21.16■□□□□ 0.98
CDPF1-202ENST00000381037 IL37Q9NZH6 218 aa21.16■□□□□ 0.98
CDPF1-202ENST00000381037 MRPS23Q9Y3D9 190 aaKnown RBP21.16■□□□□ 0.98
CDPF1-202ENST00000381037 HHLA1C9JL84 531 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 FOXN3O00409 490 aaPredicted RBP21.15■□□□□ 0.98
CDPF1-202ENST00000381037 ZNF197O14709 1029 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 CALCAP01258 141 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 FAM200BP0CF97 657 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 TPM4P67936 248 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 FANCCQ00597 558 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 DENND5BQ6ZUT9 1274 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 OTOP3Q7RTS5 596 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 TTC30AQ86WT1 665 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 SHKBP1Q8TBC3 707 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 NR2E1Q9Y466 385 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 DOCK8Q8NF50 2099 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 F11P03951 625 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 MYL4P12829 197 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 NPR3P17342 541 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 ANXA13P27216 316 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 PKDCCQ504Y2 493 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 GET4Q7L5D6 327 aaPredicted RBP21.15■□□□□ 0.98
CDPF1-202ENST00000381037 NPAS3Q8IXF0 933 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 FAM71AQ8IYT1 594 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 ANKRD52Q8NB46 1076 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 ACP6Q9NPH0 428 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 FAM207AQ9NSI2 230 aaPredicted RBP21.15■□□□□ 0.98
CDPF1-202ENST00000381037 EPS15L1Q9UBC2 864 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 TSPAN16Q9UKR8 245 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 CDH7Q9ULB5 785 aa21.15■□□□□ 0.98
CDPF1-202ENST00000381037 LAMP2P13473 410 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 KRT5P13647 590 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 CD19P15391 556 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 CEBPBP17676 345 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 SP100P23497 879 aaPredicted RBP21.14■□□□□ 0.97
CDPF1-202ENST00000381037 GABRR2P28476 465 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 MAP3K7CLP57077 242 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 DRAP1Q14919 205 aaPredicted RBP21.14■□□□□ 0.97
CDPF1-202ENST00000381037 CNGA2Q16280 664 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 LCLAT1Q6UWP7 414 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 ZDHHC14Q8IZN3 488 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 NUP93Q8N1F7 819 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 STK33Q9BYT3 514 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 PNPLA8Q9NP80 782 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 ZFP37Q9Y6Q3 630 aaPredicted RBP21.14■□□□□ 0.97
CDPF1-202ENST00000381037 GREB1Q4ZG55 1949 aa21.14■□□□□ 0.97
CDPF1-202ENST00000381037 A0A1W2PRU2 124 aa21.13■□□□□ 0.97
CDPF1-202ENST00000381037 FAM92AA1XBS5 289 aa21.13■□□□□ 0.97
CDPF1-202ENST00000381037 TADA3O75528 432 aa21.13■□□□□ 0.97
CDPF1-202ENST00000381037 SERPINC1P01008 464 aa21.13■□□□□ 0.97
CDPF1-202ENST00000381037 PNMA6AP0CW24 399 aaPredicted RBP21.13■□□□□ 0.97
CDPF1-202ENST00000381037 GJA1P17302 382 aa21.13■□□□□ 0.97
CDPF1-202ENST00000381037 CLCN1P35523 988 aa21.13■□□□□ 0.97
CDPF1-202ENST00000381037 FILIP1LQ4L180 1135 aa21.13■□□□□ 0.97
CDPF1-202ENST00000381037 TDRD5Q8NAT2 981 aaKnown RBP21.13■□□□□ 0.97
CDPF1-202ENST00000381037 RNF214Q8ND24 703 aa21.13■□□□□ 0.97
CDPF1-202ENST00000381037 ING5Q8WYH8 240 aa21.13■□□□□ 0.97
CDPF1-202ENST00000381037 ACSF2Q96CM8 615 aaPredicted RBP21.13■□□□□ 0.97
CDPF1-202ENST00000381037 UBXN6Q9BZV1 441 aa21.13■□□□□ 0.97
CDPF1-202ENST00000381037 MAGED2Q9UNF1 606 aaPredicted RBP21.13■□□□□ 0.97
CDPF1-202ENST00000381037 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.13■□□□□ 0.97
CDPF1-202ENST00000381037 DAAM1Q9Y4D1 1078 aa21.13■□□□□ 0.97
CDPF1-202ENST00000381037 A0A1W2PQC6 194 aa21.12■□□□□ 0.97
CDPF1-202ENST00000381037 FGF19O95750 216 aa21.12■□□□□ 0.97
CDPF1-202ENST00000381037 BRD2P25440 801 aaKnown RBP21.12■□□□□ 0.97
CDPF1-202ENST00000381037 JAM2P57087 298 aa21.12■□□□□ 0.97
CDPF1-202ENST00000381037 TAF12Q16514 161 aa21.12■□□□□ 0.97
CDPF1-202ENST00000381037 PTPN21Q16825 1174 aa21.12■□□□□ 0.97
CDPF1-202ENST00000381037 GJD3Q8N144 294 aa21.12■□□□□ 0.97
CDPF1-202ENST00000381037 SCAMP5Q8TAC9 235 aa21.12■□□□□ 0.97
CDPF1-202ENST00000381037 UHRF1Q96T88 793 aaPredicted RBP21.12■□□□□ 0.97
CDPF1-202ENST00000381037 GDE1Q9NZC3 331 aa21.12■□□□□ 0.97
CDPF1-202ENST00000381037 TRIOO75962 3097 aa21.12■□□□□ 0.97
CDPF1-202ENST00000381037 F8VZ95 297 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 CYP26A1O43174 497 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 GBP2P32456 591 aaPredicted RBP21.11■□□□□ 0.97
CDPF1-202ENST00000381037 SLC5A3P53794 718 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 POLR2FP61218 127 aaKnown RBP21.11■□□□□ 0.97
CDPF1-202ENST00000381037 RAPGEF1Q13905 1077 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 STILQ15468 1287 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 TEAD2Q15562 447 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 GOLGA7BQ2TAP0 167 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 GPRIN1Q7Z2K8 1008 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 PLCD3Q8N3E9 789 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 ZNF606Q8WXB4 792 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 ZSWIM3Q96MP5 696 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 UXTQ9UBK9 157 aaPredicted RBP21.11■□□□□ 0.97
CDPF1-202ENST00000381037 CDC25CP30307 473 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 PBX1P40424 430 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 USP8P40818 1118 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 PDE4CQ08493 712 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 STXBP5Q5T5C0 1151 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 NEK11Q8NG66 645 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 MCRS1Q96EZ8 462 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 ATXN3LQ9H3M9 355 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 COMMD8Q9NX08 183 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 EHD2Q9NZN4 543 aa21.11■□□□□ 0.97
CDPF1-202ENST00000381037 TULP2O00295 520 aa21.1■□□□□ 0.97
CDPF1-202ENST00000381037 RTN3O95197 1032 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms