RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 SNX16P57768 344 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 NBPF20Q3BBV1 942 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 ODF2Q5BJF6 829 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 DENND2CQ68D51 928 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 TRNP1Q6NT89 227 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 ZNF365Q70YC5 407 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 DPH6Q7L8W6 267 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 CROCCP2Q86T23 111 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 SERINC5Q86VE9 423 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 RELL1Q8IUW5 271 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 ALLCQ8N6M5 410 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 PPP1R10Q96QC0 940 aaKnown RBP20.21■□□□□ 0.83
GMDS-201ENST00000380805 CHST12Q9NRB3 414 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 DNPEPQ9ULA0 475 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.21■□□□□ 0.83
GMDS-201ENST00000380805 CDY2AQ9Y6F7 541 aa20.21■□□□□ 0.83
GMDS-201ENST00000380805 M0QZ92 97 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 PTGESO14684 152 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 RIPK2O43353 540 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 TRUB2O95900 331 aaKnown RBP20.2■□□□□ 0.82
GMDS-201ENST00000380805 NR1D1P20393 614 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 FLT3LGP49771 235 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 VCPP55072 806 aaKnown RBP20.2■□□□□ 0.82
GMDS-201ENST00000380805 KCTD16Q68DU8 428 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 PMF1Q6P1K2 205 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 CYP4V2Q6ZWL3 525 aaPredicted RBP20.2■□□□□ 0.82
GMDS-201ENST00000380805 ARCQ7LC44 396 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 RSPH3Q86UC2 560 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 HOOK3Q86VS8 718 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 TOP6BLQ8N6T0 577 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 TTC13Q8NBP0 860 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 FOXP3Q9BZS1 431 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 SENP6Q9GZR1 1112 aaPredicted RBP20.2■□□□□ 0.82
GMDS-201ENST00000380805 DNAI2Q9GZS0 605 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 SEMA4AQ9H3S1 761 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 SPC25Q9HBM1 224 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 KLK14Q9P0G3 267 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 HESX1Q9UBX0 185 aa20.2■□□□□ 0.82
GMDS-201ENST00000380805 A8MXQ7 604 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 FGFR1P11362 822 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 ITGA8P53708 1063 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 MGAT3Q09327 533 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 ZFYVE27Q5T4F4 411 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 KAZNQ674X7 775 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 TWF2Q6IBS0 349 aaKnown RBP20.19■□□□□ 0.82
GMDS-201ENST00000380805 GDF6Q6KF10 455 aaPredicted RBP20.19■□□□□ 0.82
GMDS-201ENST00000380805 CXCL17Q6UXB2 119 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 ANKRD52Q8NB46 1076 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 OR6B3Q8NGW1 331 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 PIWIL1Q96J94 861 aaKnown RBP20.19■□□□□ 0.82
GMDS-201ENST00000380805 CAPS2Q9BXY5 557 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 SRRDQ9UH36 339 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 USP18Q9UMW8 372 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 RARBP10826 455 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 WARSP23381 471 aaKnown RBP20.19■□□□□ 0.82
GMDS-201ENST00000380805 CST5P28325 142 aaPredicted RBP20.19■□□□□ 0.82
GMDS-201ENST00000380805 ARSEP51690 589 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 SLC6A3Q01959 620 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 OR6B2Q6IFH4 312 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 VSIG1Q86XK7 387 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 RXFP2Q8WXD0 754 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 KHSRPQ92945 711 aaKnown RBP eCLIP20.19■□□□□ 0.821e-6■■■□□ 14.9
GMDS-201ENST00000380805 ACSF2Q96CM8 615 aaPredicted RBP20.19■□□□□ 0.82
GMDS-201ENST00000380805 TLCD1Q96CP7 247 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 PGM2Q96G03 612 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 NCAPGQ9BPX3 1015 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 DPEP3Q9H4B8 488 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 ZWILCHQ9H900 591 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 TRIM17Q9Y577 477 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 GRIN2DO15399 1336 aa20.19■□□□□ 0.82
GMDS-201ENST00000380805 TULP2O00295 520 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 GABBR2O75899 941 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 ADCY8P40145 1251 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 BCAT1P54687 386 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 LILRA4P59901 499 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 PDE4CQ08493 712 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 BST2Q10589 180 aaKnown RBP20.18■□□□□ 0.82
GMDS-201ENST00000380805 SLC29A2Q14542 456 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 HIBCHQ6NVY1 386 aaPredicted RBP20.18■□□□□ 0.82
GMDS-201ENST00000380805 LEKR1Q6ZMV7 388 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 ARFGAP2Q8N6H7 521 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 KLHDC9Q8NEP7 349 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 APPL2Q8NEU8 664 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 FAM118BQ9BPY3 351 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 FAM49BQ9NUQ9 324 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 ANAPC5Q9UJX4 755 aa20.18■□□□□ 0.82
GMDS-201ENST00000380805 NDC80O14777 642 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 PAPSS1O43252 624 aaPredicted RBP20.17■□□□□ 0.82
GMDS-201ENST00000380805 PGK1P00558 417 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 SHBGP04278 402 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 PDGFRAP16234 1089 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 GNL1P36915 607 aaPredicted RBP20.17■□□□□ 0.82
GMDS-201ENST00000380805 IRAK1P51617 712 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 IFFO1Q0D2I5 559 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 SMTNL2Q2TAL5 461 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 KRT71Q3SY84 523 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 KCNT1Q5JUK3 1230 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 CCSAPQ6IQ19 270 aaPredicted RBP20.17■□□□□ 0.82
GMDS-201ENST00000380805 TEKT4Q8WW24 435 aa20.17■□□□□ 0.82
GMDS-201ENST00000380805 WNT8BQ93098 351 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms