RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 NOTCH4Q99466 2003 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 HHLA1C9JL84 531 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 TRIM66O15016 1216 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 ALDH1A3P47895 512 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 RPL10AP62906 217 aaKnown RBP19.87■□□□□ 0.77
SMN2-202ENST00000380742 BST2Q10589 180 aaKnown RBP19.87■□□□□ 0.77
SMN2-202ENST00000380742 RTL10Q7L3V2 364 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 C12orf76Q8N812 135 aaPredicted RBP19.87■□□□□ 0.77
SMN2-202ENST00000380742 STKLD1Q8NE28 680 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 GIPC2Q8TF65 315 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 SLC35F5Q8WV83 523 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 PCDHB18PQ96TA0 734 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 LHX5Q9H2C1 402 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 CYTH4Q9UIA0 394 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 OBSL1O75147 1896 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 DENND4CQ5VZ89 1909 aa19.87■□□□□ 0.77
SMN2-202ENST00000380742 TBX10O75333 385 aa19.86■□□□□ 0.77
SMN2-202ENST00000380742 SETSIPP0DME0 302 aa19.86■□□□□ 0.77
SMN2-202ENST00000380742 LTBRP36941 435 aa19.86■□□□□ 0.77
SMN2-202ENST00000380742 DLX2Q07687 328 aaPredicted RBP19.86■□□□□ 0.77
SMN2-202ENST00000380742 TSR1Q2NL82 804 aaKnown RBP19.86■□□□□ 0.77
SMN2-202ENST00000380742 SPATA17Q96L03 361 aa19.86■□□□□ 0.77
SMN2-202ENST00000380742 CHP1Q99653 195 aa19.86■□□□□ 0.77
SMN2-202ENST00000380742 PDCL3Q9H2J4 239 aa19.86■□□□□ 0.77
SMN2-202ENST00000380742 DZANK1Q9NVP4 752 aa19.86■□□□□ 0.77
SMN2-202ENST00000380742 CLDND1Q9NY35 253 aa19.86■□□□□ 0.77
SMN2-202ENST00000380742 CLEC1BQ9P126 229 aa19.86■□□□□ 0.77
SMN2-202ENST00000380742 BZW2Q9Y6E2 419 aaKnown RBP19.86■□□□□ 0.77
SMN2-202ENST00000380742 TNFRSF10BO14763 440 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 XPO1O14980 1071 aaKnown RBP19.85■□□□□ 0.77
SMN2-202ENST00000380742 CCL16O15467 120 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 NCK2O43639 380 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 LRG1P02750 347 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 TNFAIP3P21580 790 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 ANXA13P27216 316 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 HOXA9P31269 272 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 CDH5P33151 784 aaPredicted RBP19.85■□□□□ 0.77
SMN2-202ENST00000380742 TDRD12Q587J7 1177 aaKnown RBP19.85■□□□□ 0.77
SMN2-202ENST00000380742 ANKRD54Q6NXT1 300 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 PMF1Q6P1K2 205 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 SYCE2Q6PIF2 218 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 ELMSAN1Q6PJG2 1045 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 GPRIN1Q7Z2K8 1008 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 PIGZQ86VD9 579 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 ANP32BQ92688 251 aaKnown RBP19.85■□□□□ 0.77
SMN2-202ENST00000380742 ZNF707Q96C28 371 aaPredicted RBP19.85■□□□□ 0.77
SMN2-202ENST00000380742 PABPC5Q96DU9 382 aaKnown RBP19.85■□□□□ 0.77
SMN2-202ENST00000380742 PANX2Q96RD6 677 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 UBXN6Q9BZV1 441 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 ZNHIT6Q9NWK9 470 aaKnown RBP19.85■□□□□ 0.77
SMN2-202ENST00000380742 ZDHHC7Q9NXF8 308 aa19.85■□□□□ 0.77
SMN2-202ENST00000380742 CCDC195A0A1B0GUA6 201 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 SPDYE4A6NLX3 237 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 SLC38A8A6NNN8 435 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 GABBR2O75899 941 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 PAPLNO95428 1278 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 CYP1A1P04798 512 aaPredicted RBP19.84■□□□□ 0.77
SMN2-202ENST00000380742 HNRNPA1P09651 372 aaKnown RBP eCLIP19.84■□□□□ 0.77
SMN2-202ENST00000380742 SRGAP2BP0DMP2 458 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 PLA2G4AP47712 749 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 RGS7P49802 495 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 EPHB3P54753 998 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 SLC8A3P57103 927 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 NOMO3P69849 1222 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 PLD1Q13393 1074 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 MTMR3Q13615 1198 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 CCDC186Q7Z3E2 898 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 C1orf131Q8NDD1 294 aaKnown RBP19.84■□□□□ 0.77
SMN2-202ENST00000380742 PPM1EQ8WY54 764 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 PDLIM2Q96JY6 352 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 PRKD2Q9BZL6 878 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 SFXN1Q9H9B4 322 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 PNPLA8Q9NP80 782 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 ANAPC1Q9H1A4 1944 aa19.84■□□□□ 0.77
SMN2-202ENST00000380742 FAM170AA1A519 330 aa19.83■□□□□ 0.77
SMN2-202ENST00000380742 GOLGA6L6A8MZA4 724 aa19.83■□□□□ 0.77
SMN2-202ENST00000380742 DDX3XO00571 662 aaKnown RBP eCLIP19.83■□□□□ 0.77
SMN2-202ENST00000380742 UNGP13051 313 aaPredicted RBP19.83■□□□□ 0.77
SMN2-202ENST00000380742 EIF4A3P38919 411 aaKnown RBP19.83■□□□□ 0.77
SMN2-202ENST00000380742 USP46P62068 366 aa19.83■□□□□ 0.77
SMN2-202ENST00000380742 CDK17Q00537 523 aa19.83■□□□□ 0.77
SMN2-202ENST00000380742 TMC5Q6UXY8 1006 aa19.83■□□□□ 0.77
SMN2-202ENST00000380742 EP400NLQ6ZTU2 488 aa19.83■□□□□ 0.77
SMN2-202ENST00000380742 DENND5BQ6ZUT9 1274 aa19.83■□□□□ 0.77
SMN2-202ENST00000380742 NUP93Q8N1F7 819 aa19.83■□□□□ 0.77
SMN2-202ENST00000380742 TMEM35BQ8NCS4 154 aa19.83■□□□□ 0.77
SMN2-202ENST00000380742 SLC30A5Q8TAD4 765 aa19.83■□□□□ 0.77
SMN2-202ENST00000380742 CEP295NLQ96MC4 621 aa19.83■□□□□ 0.77
SMN2-202ENST00000380742 APOL5Q9BWW9 433 aa19.83■□□□□ 0.77
SMN2-202ENST00000380742 SEPT11Q9NVA2 429 aaKnown RBP19.83■□□□□ 0.77
SMN2-202ENST00000380742 PRUNE2Q8WUY3 3088 aa19.83■□□□□ 0.76
SMN2-202ENST00000380742 XIRP2A4UGR9 3374 aa19.83■□□□□ 0.76
SMN2-202ENST00000380742 LSM8O95777 96 aaKnown RBP19.83■□□□□ 0.76
SMN2-202ENST00000380742 HMGA1P17096 107 aaKnown RBP19.83■□□□□ 0.76
SMN2-202ENST00000380742 FECHP22830 423 aa19.83■□□□□ 0.76
SMN2-202ENST00000380742 RPL34P49207 117 aaKnown RBP19.83■□□□□ 0.76
SMN2-202ENST00000380742 SLC5A3P53794 718 aa19.83■□□□□ 0.76
SMN2-202ENST00000380742 PDCLQ13371 301 aa19.83■□□□□ 0.76
SMN2-202ENST00000380742 MAPK8IP2Q13387 824 aaPredicted RBP19.83■□□□□ 0.76
SMN2-202ENST00000380742 VEPH1Q14D04 833 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms