RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 MFSD10Q14728 455 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 KCNT1Q5JUK3 1230 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 TMEM130Q8N3G9 435 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 ACTL9Q8TC94 416 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 OSMRQ99650 979 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 ADAM7Q9H2U9 754 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 INTS9Q9NV88 658 aaKnown RBP13.23□□□□□ -0.29
VPS16-202ENST00000380445 CNTN3Q9P232 1028 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 UBQLN1Q9UMX0 589 aaKnown RBP13.23□□□□□ -0.29
VPS16-202ENST00000380445 SHOC2Q9UQ13 582 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 RALGAPA2Q2PPJ7 1873 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 CDH16O75309 829 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 PDGFRAP16234 1089 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 MAGEA4P43358 317 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 OTUD4Q01804 1114 aaKnown RBP13.23□□□□□ -0.29
VPS16-202ENST00000380445 UBAP2Q5T6F2 1119 aaKnown RBP13.23□□□□□ -0.29
VPS16-202ENST00000380445 MAP7D3Q8IWC1 876 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 RIBC1Q8N443 379 aaPredicted RBP13.23□□□□□ -0.29
VPS16-202ENST00000380445 HAUS1Q96CS2 278 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 TMEM121Q9BTD3 319 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 KATNAL1Q9BW62 490 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 MAK16Q9BXY0 300 aaKnown RBP13.23□□□□□ -0.29
VPS16-202ENST00000380445 DNAJC17Q9NVM6 304 aaKnown RBP13.23□□□□□ -0.29
VPS16-202ENST00000380445 PCSK1NQ9UHG2 260 aa13.23□□□□□ -0.29
VPS16-202ENST00000380445 E5RJQ4 531 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 APOC4-APOC2K7ER74 178 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 SMAPO00193 183 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 APOC2P02655 101 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 GOLGA7BQ2TAP0 167 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 ALKAL1Q6UXT8 129 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 RFX6Q8HWS3 928 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 ZDHHC17Q8IUH5 632 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 MDM1Q8TC05 714 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 RSAD2Q8WXG1 361 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 KAT2BQ92831 832 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 ARHGEF2Q92974 986 aaKnown RBP13.22□□□□□ -0.29
VPS16-202ENST00000380445 CHMP6Q96FZ7 201 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 CPA4Q9UI42 421 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 Q9Y3F1 56 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 C2CD4BA6NLJ0 364 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 PPP1R12AO14974 1030 aaPredicted RBP13.22□□□□□ -0.29
VPS16-202ENST00000380445 PRPSAP2O60256 369 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 IFNB1P01574 187 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 PNPLA4P41247 253 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 DYNLT1P63172 113 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 TFDP2Q14188 446 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 FAM47CQ5HY64 1035 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 PRAMEF19Q5SWL8 479 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 PPP1R26Q5T8A7 1209 aaPredicted RBP13.22□□□□□ -0.29
VPS16-202ENST00000380445 FAM183BPQ6ZVS7 135 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 YTHDF3Q7Z739 585 aaKnown RBP13.22□□□□□ -0.29
VPS16-202ENST00000380445 CPLX4Q7Z7G2 160 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 EXOC3L1Q86VI1 746 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 STK32AQ8WU08 396 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 RXFP2Q8WXD0 754 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 HSPH1Q92598 858 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 ZMAT2Q96NC0 199 aaKnown RBP13.22□□□□□ -0.29
VPS16-202ENST00000380445 EIF2AQ9BY44 585 aaKnown RBP13.22□□□□□ -0.29
VPS16-202ENST00000380445 PHACTR1Q9C0D0 580 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 AP5M1Q9H0R1 490 aa13.22□□□□□ -0.29
VPS16-202ENST00000380445 GNAT1P11488 350 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 PSEN2P49810 448 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 BOLA3Q53S33 107 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 CENPUQ71F23 418 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 ACOT1Q86TX2 421 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 SESTD1Q86VW0 696 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 C12orf29Q8N999 325 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 ZNF560Q96MR9 790 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 MRPL45Q9BRJ2 306 aaKnown RBP13.21□□□□□ -0.29
VPS16-202ENST00000380445 CALN1Q9BXU9 219 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 PPCSQ9HAB8 311 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 CDHR5Q9HBB8 845 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 SAYSD1Q9NPB0 183 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 C5orf60A6NFR6 353 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 MCF2LO15068 1137 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 CAPN15O75808 1086 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 RECQL4O94761 1208 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 PFKMP08237 780 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 ZSCAN5DPP0CG00 497 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 ZNF865P0CJ78 1059 aaPredicted RBP13.21□□□□□ -0.29
VPS16-202ENST00000380445 CYP3A5P20815 502 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 ADAM17P78536 824 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 PPARDQ03181 441 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 PKDCCQ504Y2 493 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 RNASEH2BQ5TBB1 312 aaKnown RBP13.21□□□□□ -0.29
VPS16-202ENST00000380445 C9orf57Q5W0N0 161 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 TMEM110Q86TL2 294 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 PRUNE1Q86TP1 453 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 NME8Q8N427 588 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 GLIS1Q8NBF1 620 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 OR6B3Q8NGW1 331 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 DNAJB3Q8WWF6 145 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 C9orf72Q96LT7 481 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 SLC4A5Q9BY07 1137 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 CCDC134Q9H6E4 229 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 LGALS13Q9UHV8 139 aa13.21□□□□□ -0.29
VPS16-202ENST00000380445 HAS3O00219 553 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 DPYSL4O14531 572 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 ENDOD1O94919 500 aa13.2□□□□□ -0.3
VPS16-202ENST00000380445 PECAM1P16284 738 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms