RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 C4AP0C0L4 1744 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 C4BP0C0L5 1744 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 TCRBV7S2A1N4TA0A589 114 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 PRPF4O43172 522 aaKnown RBP eCLIP8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 LIFRP42702 1097 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 KCNC4Q03721 635 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 BBS9Q3SYG4 887 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 SCARA3Q6AZY7 606 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 CENPPQ6IPU0 288 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 MAMSTRQ6ZN01 415 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 FRA10AC1Q70Z53 315 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 DYMQ7RTS9 669 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 KIAA0895Q8NCT3 520 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 DCPSQ96C86 337 aaKnown RBP8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 SHISA4Q96DD7 197 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 MYD88Q99836 296 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 DHRS9Q9BPW9 319 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 TRIM9Q9C026 710 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 KBTBD4Q9NVX7 518 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 ATPIF1Q9UII2 106 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 SLC30A1Q9Y6M5 507 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 DLC1Q96QB1 1528 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 ERVV-2B6SEH9 535 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 IRS4O14654 1257 aaPredicted RBP8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 ACSL4O60488 711 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 SNX2O60749 519 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 BMP10O95393 424 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 PRDX6P30041 224 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 COPZ1P61923 177 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 DNASE1L3Q13609 305 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 LDLRAP1Q5SW96 308 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 OGFRL1Q5TC84 451 aaPredicted RBP8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 KYAT3Q6YP21 454 aaKnown RBP8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 IGFN1Q86VF2 1251 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 UBL4BQ8N7F7 174 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 C1orf54Q8WWF1 131 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 NLRP7Q8WX94 980 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 DACT3Q96B18 629 aaPredicted RBP8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 TRIT1Q9H3H1 467 aaKnown RBP8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 VPS45Q9NRW7 570 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 SOX13Q9UN79 622 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 PCDHA3Q9Y5H8 950 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 NOL3O60936 208 aaKnown RBP8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 KITP10721 976 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 MCF2P10911 925 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 HSPA6P17066 643 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 PLCG1P19174 1290 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 EIF2AK2P19525 551 aaKnown RBP8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 HADHAP40939 763 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 CDKL1Q00532 357 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 STILQ15468 1287 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 TRIM71Q2Q1W2 868 aaKnown RBP8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 FAM182AQ5T1J6 154 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 LSMEM2Q8N112 164 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 PQLC1Q8N2U9 271 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 VGLL2Q8N8G2 317 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 JADE3Q92613 823 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 CITED4Q96RK1 184 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 NUDT12Q9BQG2 462 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 AIFM2Q9BRQ8 373 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 RUBCNLQ9H714 662 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 TMEM206Q9H813 350 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 VPS37BQ9H9H4 285 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 KCNK13Q9HB14 408 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 ANKMY1Q9P2S6 941 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 CPQQ9Y646 472 aa8.85□□□□□ -0.99
NHLRC3-201ENST00000379599 RIMBP3CA6NJZ7 1639 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 RIMBP3BA6NNM3 1639 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 RIMBP3Q9UFD9 1639 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 ARPC4-TTLL3A0A0A6YYG9 625 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 PRR5-ARHGAP8B1AHC4 643 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 H3BNX3 289 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 GOLGA8MH3BSY2 632 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 RSL1D1O76021 490 aaKnown RBP8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 IGKV5-2P06315 115 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 MX2P20592 715 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 ALDH3B2P48448 385 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 MARCKSL1P49006 195 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 ARHGAP8P85298 464 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 EPHA7Q15375 998 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 NEK5Q6P3R8 708 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 SLC51BQ86UW2 128 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 LINC00469Q8N7U9 141 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 BBOF1Q8ND07 529 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 APPL2Q8NEU8 664 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 GRK7Q8WTQ7 553 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 HDAC2Q92769 488 aaKnown RBP8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 TTC17Q96AE7 1141 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 SMARCAD1Q9H4L7 1026 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 PADI4Q9UM07 663 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 MYRFQ9Y2G1 1151 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 RWDD3Q9Y3V2 267 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 SQORQ9Y6N5 450 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 SYNGAP1Q96PV0 1343 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 SNPHO15079 494 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 IDH3BO43837 385 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 TCEA3O75764 348 aa8.84□□□□□ -0.99
NHLRC3-201ENST00000379599 ALX3O95076 343 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms