RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 EXTL3O43909 919 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 SPAG6O75602 509 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 MT-ND3P03897 115 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 MAN1A1P33908 653 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 PHKA2P46019 1235 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 STT3AP46977 705 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 PON2Q15165 354 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 GPATCH4Q5T3I0 446 aaKnown RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 LGSNQ5TDP6 509 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 RSBN1LQ6PCB5 846 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 PRPF39Q86UA1 669 aaKnown RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 LRRC47Q8N1G4 583 aaKnown RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 PROM2Q8N271 834 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 ACTRT1Q8TDG2 376 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 CEP19Q96LK0 163 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 THAP1Q9NVV9 213 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 SOX13Q9UN79 622 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 RCCD1A6NED2 376 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 IFNA16P05015 189 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 POLR2MP0CAP2 368 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 ALDH1A3P47895 512 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 ALDH18A1P54886 795 aaKnown RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 DAB2P98082 770 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 AUHQ13825 339 aaKnown RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 CCDC14Q49A88 953 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 CERKLQ49MI3 558 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 ALKBH5Q6P6C2 394 aaKnown RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 ZNF572Q7Z3I7 529 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 TMC7Q7Z402 723 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 GIMAP8Q8ND71 665 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 EMILIN2Q9BXX0 1053 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.23□□□□□ -0.45
NPHP4-202ENST00000378161 DNAJB4Q9UDY4 337 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 DIP2AQ14689 1571 aa12.23□□□□□ -0.45
NPHP4-202ENST00000378161 SPATA31A3Q5VYP0 1347 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 PLEKP08567 350 aaPredicted RBP12.22□□□□□ -0.45
NPHP4-202ENST00000378161 CDK9P50750 372 aaKnown RBP12.22□□□□□ -0.45
NPHP4-202ENST00000378161 TMPRSS15P98073 1019 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 ZBTB41Q5SVQ8 909 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 DCDC5Q6ZRR9 648 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 EDEM3Q9BZQ6 932 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 TAGLN3Q9UI15 199 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 PLAGL2Q9UPG8 496 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 TBCCQ15814 346 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 OGFOD2Q6N063 350 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 AMIGO2Q86SJ2 522 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 ZFP28Q8NHY6 868 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 LRRC39Q96DD0 335 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 PIGSQ96S52 555 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 SPATA31D1Q6ZQQ2 1576 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 PSMD12O00232 456 aaPredicted RBP12.22□□□□□ -0.45
NPHP4-202ENST00000378161 NCF2P19878 526 aaPredicted RBP12.22□□□□□ -0.45
NPHP4-202ENST00000378161 KLRC1P26715 233 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 HNRNPFP52597 415 aaKnown RBP12.22□□□□□ -0.45
NPHP4-202ENST00000378161 KLHL38Q2WGJ6 581 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 FSCBQ5H9T9 825 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 FAM209AQ5JX71 171 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 C4orf33Q8N1A6 199 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 MTMR8Q96EF0 704 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 BIRC8Q96P09 236 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 MAP3K14Q99558 947 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 EMILIN3Q9NT22 766 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 FBXO40Q9UH90 709 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 USP21Q9UK80 565 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 CHKBQ9Y259 395 aa12.22□□□□□ -0.45
NPHP4-202ENST00000378161 FAM172BPA6NC97 362 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 FAM205CA6NFA0 338 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 KRT37O76014 449 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 GYS1P13807 737 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 CAV1Q03135 178 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 CARTPTQ16568 116 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 WDR44Q5JSH3 913 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 SNAP47Q5SQN1 464 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 LVRNQ6Q4G3 990 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 PPP4R3CPQ6ZMV5 832 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 CAND1Q86VP6 1230 aaKnown RBP12.21□□□□□ -0.45
NPHP4-202ENST00000378161 NDUFAF2Q8N183 169 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 ASCC1Q8N9N2 400 aaKnown RBP12.21□□□□□ -0.45
NPHP4-202ENST00000378161 NPLOC4Q8TAT6 608 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 RBM15Q96T37 977 aaKnown RBP eCLIP12.21□□□□□ -0.458e-10■■■■■ 32.2
NPHP4-202ENST00000378161 TMEM79Q9BSE2 394 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 CEP72Q9P209 647 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 IGSF9Q9P2J2 1179 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 ZNF221Q9UK13 617 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 SNX5Q9Y5X3 404 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 A0A1W2PQJ5 194 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 STMND1H3BQB6 276 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 SGTAO43765 313 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 UBL4AP11441 157 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 MARSP56192 900 aaKnown RBP12.21□□□□□ -0.45
NPHP4-202ENST00000378161 ECT2LQ008S8 904 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 ORC2Q13416 577 aaPredicted RBP12.21□□□□□ -0.45
NPHP4-202ENST00000378161 CRY1Q16526 586 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 MEA1Q16626 185 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 LIN9Q5TKA1 542 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 TPH2Q8IWU9 490 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 GUF1Q8N442 669 aaKnown RBP12.21□□□□□ -0.45
NPHP4-202ENST00000378161 ZNF398Q8TD17 642 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 GJA10Q969M2 543 aa12.21□□□□□ -0.45
NPHP4-202ENST00000378161 LIN28AQ9H9Z2 209 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms