RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 PAPOLBQ9NRJ5 636 aaKnown RBP18.83■□□□□ 0.6
GNE-201ENST00000377902 KRT82Q9NSB4 513 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 SLC9A2Q9UBY0 812 aa18.83■□□□□ 0.6
GNE-201ENST00000377902 MARCOQ9UEW3 520 aaPredicted RBP18.83■□□□□ 0.6
GNE-201ENST00000377902 LTBP4Q8N2S1 1624 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 CCDC195A0A1B0GUA6 201 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 E7ESA3 106 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 H3BRJ5 948 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 AP1G2O75843 785 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 ENO1P06733 434 aaKnown RBP18.82■□□□□ 0.6
GNE-201ENST00000377902 FESP07332 822 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 YWHAGP61981 247 aaKnown RBP eCLIP18.82■□□□□ 0.6
GNE-201ENST00000377902 MMRN1Q13201 1228 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 CIAPIN1Q6FI81 312 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 DENND1BQ6P3S1 775 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 RSBN1LQ6PCB5 846 aaPredicted RBP18.82■□□□□ 0.6
GNE-201ENST00000377902 SHKBP1Q8TBC3 707 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 HSPH1Q92598 858 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 SYNCQ9H7C4 482 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 JPH1Q9HDC5 661 aaPredicted RBP18.82■□□□□ 0.6
GNE-201ENST00000377902 DDX56Q9NY93 547 aaKnown RBP18.82■□□□□ 0.6
GNE-201ENST00000377902 RPL26L1Q9UNX3 145 aaKnown RBP18.82■□□□□ 0.6
GNE-201ENST00000377902 MTO1Q9Y2Z2 717 aaKnown RBP18.82■□□□□ 0.6
GNE-201ENST00000377902 ASB3Q9Y575 518 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 CTDP1Q9Y5B0 961 aaPredicted RBP18.82■□□□□ 0.6
GNE-201ENST00000377902 STYXL1Q9Y6J8 313 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 CYB561D2O14569 222 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 PSAPP07602 524 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 RARBP10826 455 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 KDELR1P24390 212 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 YY1P25490 414 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 PTPN7P35236 360 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 PGM1P36871 562 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 LBRQ14739 615 aaKnown RBP18.82■□□□□ 0.6
GNE-201ENST00000377902 PTPN20Q4JDL3 420 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 RAB6CQ53S08 254 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 SLC30A9Q6PML9 568 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 TMEM35BQ8NCS4 154 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 DEPTORQ8TB45 409 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 FAM161BQ96MY7 647 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 RAB6CQ9H0N0 254 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 LRCH1Q9Y2L9 728 aa18.82■□□□□ 0.6
GNE-201ENST00000377902 KIAA1217Q5T5P2 1943 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 A0A0B4J269 797 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 B2RBV5 119 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 HNRNPCL1O60812 293 aaKnown RBP18.81■□□□□ 0.6
GNE-201ENST00000377902 NPTXRO95502 500 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 SERPINB4P48594 390 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 EIF3EP60228 445 aaKnown RBP18.81■□□□□ 0.6
GNE-201ENST00000377902 DPYSL3Q14195 570 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 SGSM1Q2NKQ1 1148 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 ZC3H12AQ5D1E8 599 aaKnown RBP18.81■□□□□ 0.6
GNE-201ENST00000377902 CCDC62Q6P9F0 684 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 RFX6Q8HWS3 928 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 UBR7Q8N806 425 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 STMN2Q93045 179 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 ATG4CQ96DT6 458 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 CFAP36Q96G28 342 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 APOPT1Q96IL0 206 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 CYTH2Q99418 400 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 TRIM56Q9BRZ2 755 aaKnown RBP18.81■□□□□ 0.6
GNE-201ENST00000377902 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.81■□□□□ 0.6
GNE-201ENST00000377902 SMAPO00193 183 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 KIF3CO14782 793 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 WDR46O15213 610 aaKnown RBP18.81■□□□□ 0.6
GNE-201ENST00000377902 DNAJC6O75061 913 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 PAPOLAP51003 745 aaKnown RBP18.81■□□□□ 0.6
GNE-201ENST00000377902 SARNPP82979 210 aaKnown RBP18.81■□□□□ 0.6
GNE-201ENST00000377902 SP2Q02086 613 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 KDSRQ06136 332 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 MEX3CQ5U5Q3 659 aaKnown RBP18.81■□□□□ 0.6
GNE-201ENST00000377902 IRGCQ6NXR0 463 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 CALN1Q9BXU9 219 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 CNTN3Q9P232 1028 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 FETUBQ9UGM5 382 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 IKBKGQ9Y6K9 419 aa18.81■□□□□ 0.6
GNE-201ENST00000377902 ARID2Q68CP9 1835 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 CXorf49A8MYA2 514 aaPredicted RBP18.8■□□□□ 0.6
GNE-201ENST00000377902 UGT1A9O60656 530 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 STAM2O75886 525 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 MAP3K6O95382 1288 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 ASS1P00966 412 aaKnown RBP18.8■□□□□ 0.6
GNE-201ENST00000377902 INHBAP08476 426 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 UBTFL6P0CB48 400 aaPredicted RBP18.8■□□□□ 0.6
GNE-201ENST00000377902 KRT3P12035 628 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 RTP1P59025 263 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 ZNF200P98182 395 aaPredicted RBP18.8■□□□□ 0.6
GNE-201ENST00000377902 MTMR2Q13614 643 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 CCNJLQ8IV13 435 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 CTAGE3PQ8IX95 158 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 KCTD6Q8NC69 237 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 ALKBH8Q96BT7 664 aaKnown RBP18.8■□□□□ 0.6
GNE-201ENST00000377902 SH3GL3Q99963 347 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 SLC13A1Q9BZW2 595 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 UGT1A7Q9HAW7 530 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 UGT1A10Q9HAW8 530 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 UGT1A8Q9HAW9 530 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 RNF146Q9NTX7 359 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 STRIP2Q9ULQ0 834 aa18.8■□□□□ 0.6
GNE-201ENST00000377902 TBC1D12O60347 775 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms