RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 PCDHB5Q9Y5E4 795 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 MON2Q7Z3U7 1717 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 WNT7AO00755 349 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 IRF6O14896 467 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 CORO7P57737 925 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 COPS2P61201 443 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 PDIA2Q13087 525 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 FNDC3BQ53EP0 1204 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 KIAA1324Q6UXG2 1013 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 KIF2BQ8N4N8 673 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 PPM1NQ8N819 430 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 AGPAT1Q99943 283 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 CBWD1Q9BRT8 395 aa11.25□□□□□ -0.61
HIF3A-205ENST00000377670 DDX56Q9NY93 547 aaKnown RBP11.25□□□□□ -0.61
HIF3A-205ENST00000377670 LTN1O94822 1766 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 FAM187AA6NFU0 413 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 MEI4A8MW99 385 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 ITGB3P05106 788 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 ENO1P06733 434 aaKnown RBP11.24□□□□□ -0.61
HIF3A-205ENST00000377670 SREBF1P36956 1147 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 EFHC1Q5JVL4 640 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 TEDDM1Q5T9Z0 273 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 MOB2Q70IA6 237 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 EHD4Q9H223 541 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 PXMP2Q9NR77 195 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 LATS2Q9NRM7 1088 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 TBC1D3BA6NDS4 549 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 PPM1AP35813 382 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 HIRAP54198 1017 aaPredicted RBP11.24□□□□□ -0.61
HIF3A-205ENST00000377670 GALCP54803 685 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 ALDH18A1P54886 795 aaKnown RBP11.24□□□□□ -0.61
HIF3A-205ENST00000377670 KDSRQ06136 332 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 POU5F1BQ06416 359 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 RBBP7Q16576 425 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 SPDYE7PQ495Y7 208 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 GPR142Q7Z601 462 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 OR2W6PQ8NHA6 318 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 TRPM4Q8TD43 1214 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 GMCL1Q96IK5 515 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 CPB2Q96IY4 423 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 FAM96AQ9H5X1 160 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 PAIP2BQ9ULR5 123 aaKnown RBP11.24□□□□□ -0.61
HIF3A-205ENST00000377670 PKP3Q9Y446 797 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 SPACA6W5XKT8 324 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 FMN2Q9NZ56 1722 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 C3orf70A6NLC5 250 aaPredicted RBP11.24□□□□□ -0.61
HIF3A-205ENST00000377670 OPLAHO14841 1288 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 ADH1AP07327 375 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 TGFB3P10600 412 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 HDAC4P56524 1084 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 AMHR2Q16671 573 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 DCAF6Q58WW2 860 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 KCNK18Q7Z418 384 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 CBWD2Q8IUF1 395 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 PARVAQ9NVD7 372 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 SNX12Q9UMY4 172 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 NRXN3Q9Y4C0 1643 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 KPNA7A9QM74 516 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 EPB42P16452 691 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 LSP1P33241 339 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 CAPRIN1Q14444 709 aaKnown RBP11.24□□□□□ -0.61
HIF3A-205ENST00000377670 HIC1Q14526 733 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 MORF4L2Q15014 288 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 SYTL5Q8TDW5 730 aaPredicted RBP11.24□□□□□ -0.61
HIF3A-205ENST00000377670 FUCA2Q9BTY2 467 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 GIMAP4Q9NUV9 329 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 PSD3Q9NYI0 1048 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 VPS28Q9UK41 221 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 KIF13AQ9H1H9 1805 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 PSMD3O43242 534 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 VIL1P09327 827 aaKnown RBP11.24□□□□□ -0.61
HIF3A-205ENST00000377670 INSRRP14616 1297 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 ROR1Q01973 937 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 GPS1Q13098 491 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 ZNF284Q2VY69 593 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 DACH2Q96NX9 599 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 ADAM2Q99965 735 aa11.24□□□□□ -0.61
HIF3A-205ENST00000377670 MED1Q15648 1581 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 FAM47E-STBD1D6RA91 191 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 NDUFS3O75489 264 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 PYGLP06737 847 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 CCDC159P0C7I6 412 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 CTSEP14091 401 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 ACO1P21399 889 aaKnown RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 CCND1P24385 295 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 LHX1P48742 406 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 C21orf59P57076 290 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 CNTN2Q02246 1040 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 GIT2Q14161 759 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 PRAMEF19Q5SWL8 479 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 PPP2R2DQ66LE6 453 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 CCNI2Q6ZMN8 369 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 GLIS3Q8NEA6 775 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 RUBCNQ92622 972 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 CYFIP2Q96F07 1278 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 FTHL17Q9BXU8 183 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 NEUROG2Q9H2A3 272 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 RSAD1Q9HA92 442 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 WDR35Q9P2L0 1181 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms