RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ZNF571Q7Z3V5 609 aaPredicted RBP8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 NT5DC4Q86YG4 428 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ATP11CQ8NB49 1132 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 OSBPL8Q9BZF1 889 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 PDZD7Q9H5P4 517 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 SAYSD1Q9NPB0 183 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 OSGEPQ9NPF4 335 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 DDX56Q9NY93 547 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 AMACRQ9UHK6 382 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 PLA2G4CQ9UP65 541 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ARL5CA6NH57 179 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 PMPCBO75439 489 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ALDH3A1P30838 453 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 NCKAP1LP55160 1127 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 SLMAPQ14BN4 828 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 CDKAL1Q5VV42 579 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 CCDC137Q6PK04 289 aaKnown RBP8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 SLC25A41Q8N5S1 370 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 WDR24Q96S15 920 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 ARHGAP28Q9P2N2 729 aa8.85□□□□□ -0.99
CRNKL1-202ENST00000377340 EFCAB14O75071 495 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 MICAL2O94851 1124 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 F2P00734 622 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 SLC2A3P11169 496 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 PIGZQ86VD9 579 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 DEFB106AQ8N104 65 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 B3GALNT2Q8NCR0 500 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 ST13P5Q8NFI4 369 aaPredicted RBP8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 FAM76AQ8TAV0 307 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 ATXN7L3BQ96GX2 97 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 NUDCD1Q96RS6 583 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 CDHR5Q9HBB8 845 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 ASAH2Q9NR71 780 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 RAB6BQ9NRW1 208 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 TLK1Q9UKI8 766 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 NFU1Q9UMS0 254 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 ANGPTL3Q9Y5C1 460 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 MX2P20592 715 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 GLUD2P49448 558 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 MTMR3Q13615 1198 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 PCBP1Q15365 356 aaKnown RBP eCLIP8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 ZACNQ401N2 412 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 BOLA3Q53S33 107 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 KRT222Q8N1A0 295 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 EXOC4Q96A65 974 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 CELF6Q96J87 481 aaKnown RBP8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 CATSPERBQ9H7T0 1116 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 C2CD2Q9Y426 696 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 IRS2Q9Y4H2 1338 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 RGS20O76081 388 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 SETSIPP0DME0 302 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 LAG3P18627 525 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 ARSEP51690 589 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 GJA9P57773 515 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 MBTD1Q05BQ5 628 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 TARBP2Q15633 366 aaKnown RBP8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 FAXCQ5TGI0 409 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 PHLDB3Q6NSJ2 640 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 TMC5Q6UXY8 1006 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 B4GALNT4Q76KP1 1039 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 TMEM192Q8IY95 271 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 TMEM86AQ8N2M4 240 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 ZSWIM2Q8NEG5 633 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 IPMKQ8NFU5 416 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 UCMAQ8WVF2 138 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 FMO2Q99518 471 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 FLRT1Q9NZU1 646 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 MARCH2Q9P0N8 246 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 RNF14Q9UBS8 474 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 AFF4Q9UHB7 1163 aaKnown RBP8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 FIS1Q9Y3D6 152 aa8.84□□□□□ -0.99
CRNKL1-202ENST00000377340 TBC1D3BA6NDS4 549 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 ZFXP17010 805 aaPredicted RBP8.83□□□□□ -1
CRNKL1-202ENST00000377340 CAPN2P17655 700 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 GABRR2P28476 465 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 RPL9P32969 192 aaKnown RBP8.83□□□□□ -1
CRNKL1-202ENST00000377340 SLC1A1P43005 524 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 MSH2P43246 934 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 TBX4P57082 545 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 GCNT1Q02742 428 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 PRSS55Q6UWB4 352 aaPredicted RBP8.83□□□□□ -1
CRNKL1-202ENST00000377340 CCDC149Q6ZUS6 474 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 SLFN11Q7Z7L1 901 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 NPAS4Q8IUM7 802 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 RSPH1Q8WYR4 309 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 SMG7Q92540 1137 aaKnown RBP8.83□□□□□ -1
CRNKL1-202ENST00000377340 FAM114A2Q9NRY5 505 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 C4AP0C0L4 1744 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 TRDMT1O14717 391 aaKnown RBP8.83□□□□□ -1
CRNKL1-202ENST00000377340 F9P00740 461 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 KRT14P02533 472 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 TMEM253P0C7T8 217 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 ATP1A2P50993 1020 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 NFIL3Q16649 462 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 ITPRIPL1Q6GPH6 555 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 LRRC55Q6ZSA7 311 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 CENPUQ71F23 418 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 C16orf59Q7L2K0 433 aa8.83□□□□□ -1
CRNKL1-202ENST00000377340 TMCO2Q7Z6W1 182 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms