RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 PDGFRAP16234 1089 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 PECAM1P16284 738 aaPredicted RBP21.21■□□□□ 0.99
VSX1-202ENST00000376709 MAGEA9P43362 315 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 MORF4L2Q15014 288 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 TAF5Q15542 800 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 PPP1R26Q5T8A7 1209 aaPredicted RBP21.21■□□□□ 0.99
VSX1-202ENST00000376709 ACOT1Q86TX2 421 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 CNPY3Q9BT09 278 aa21.21■□□□□ 0.99
VSX1-202ENST00000376709 FRMD8P1Q9BZ68 369 aaPredicted RBP21.21■□□□□ 0.99
VSX1-202ENST00000376709 NDC80O14777 642 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 GRAP2O75791 330 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 DARSP14868 501 aaKnown RBP21.2■□□□□ 0.98
VSX1-202ENST00000376709 PCK1P35558 622 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 RGS7P49802 495 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 PCBP1Q15365 356 aaKnown RBP eCLIP21.2■□□□□ 0.98
VSX1-202ENST00000376709 C17orf99Q6UX52 265 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 CMASQ8NFW8 434 aaPredicted RBP21.2■□□□□ 0.98
VSX1-202ENST00000376709 ATXN2LQ8WWM7 1075 aaKnown RBP21.2■□□□□ 0.98
VSX1-202ENST00000376709 C18orf25Q96B23 403 aaPredicted RBP21.2■□□□□ 0.98
VSX1-202ENST00000376709 CHMP6Q96FZ7 201 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 APOL6Q9BWW8 343 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 NXF3Q9H4D5 531 aaKnown RBP21.2■□□□□ 0.98
VSX1-202ENST00000376709 FAM49BQ9NUQ9 324 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 TCEA3O75764 348 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 PFKMP08237 780 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 MFSD10Q14728 455 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 TAZQ16635 292 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 CDO1Q16878 200 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 RXFP2Q8WXD0 754 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 RSAD2Q8WXG1 361 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 USP6NLQ92738 828 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 PIWIL1Q96J94 861 aaKnown RBP21.2■□□□□ 0.98
VSX1-202ENST00000376709 CFAP57Q96MR6 1250 aa21.2■□□□□ 0.98
VSX1-202ENST00000376709 MBLAC1A4D2B0 266 aaPredicted RBP21.19■□□□□ 0.98
VSX1-202ENST00000376709 C2CD4BA6NLJ0 364 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 RECQL4O94761 1208 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 HIC1Q14526 733 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 STAT4Q14765 748 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 QPCTQ16769 361 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 SH3PXD2AQ5TCZ1 1133 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 RGMBQ6NW40 437 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 SAPCD2Q86UD0 394 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 IFNL1Q8IU54 200 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 LRRC52Q8N7C0 313 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 DNAJB3Q8WWF6 145 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 HESX1Q9UBX0 185 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 TBK1Q9UHD2 729 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 SHOC2Q9UQ13 582 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 PIN4Q9Y237 131 aaKnown RBP21.19■□□□□ 0.98
VSX1-202ENST00000376709 ATXN2Q99700 1313 aaKnown RBP21.19■□□□□ 0.98
VSX1-202ENST00000376709 AKAP5P24588 427 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 ZBTB6Q15916 424 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 C15orf59Q2T9L4 293 aaPredicted RBP21.19■□□□□ 0.98
VSX1-202ENST00000376709 RNASEH2BQ5TBB1 312 aaKnown RBP21.19■□□□□ 0.98
VSX1-202ENST00000376709 OR6B3Q8NGW1 331 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 PRMT1Q99873 361 aaKnown RBP21.19■□□□□ 0.98
VSX1-202ENST00000376709 MAK16Q9BXY0 300 aaKnown RBP21.19■□□□□ 0.98
VSX1-202ENST00000376709 C10orf88Q9H8K7 445 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 RSAD1Q9HA92 442 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.19■□□□□ 0.98
VSX1-202ENST00000376709 RNF19AQ9NV58 838 aa21.19■□□□□ 0.98
VSX1-202ENST00000376709 DDX20Q9UHI6 824 aaKnown RBP21.19■□□□□ 0.98
VSX1-202ENST00000376709 APOC4-APOC2K7ER74 178 aa21.18■□□□□ 0.98
VSX1-202ENST00000376709 PRPSAP2O60256 369 aa21.18■□□□□ 0.98
VSX1-202ENST00000376709 CDH16O75309 829 aa21.18■□□□□ 0.98
VSX1-202ENST00000376709 APOC2P02655 101 aa21.18■□□□□ 0.98
VSX1-202ENST00000376709 RDXP35241 583 aaKnown RBP21.18■□□□□ 0.98
VSX1-202ENST00000376709 GDF10P55107 478 aa21.18■□□□□ 0.98
VSX1-202ENST00000376709 BEX3Q00994 111 aa21.18■□□□□ 0.98
VSX1-202ENST00000376709 PMF1Q6P1K2 205 aa21.18■□□□□ 0.98
VSX1-202ENST00000376709 TTC25Q96NG3 672 aa21.18■□□□□ 0.98
VSX1-202ENST00000376709 PEBP4Q96S96 227 aa21.18■□□□□ 0.98
VSX1-202ENST00000376709 CNTN3Q9P232 1028 aa21.18■□□□□ 0.98
VSX1-202ENST00000376709 DNAH12Q6ZR08 3092 aa21.18■□□□□ 0.98
VSX1-202ENST00000376709 A0A087WUV0 522 aaPredicted RBP21.17■□□□□ 0.98
VSX1-202ENST00000376709 ABHD2P08910 425 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 CDH6P55285 790 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 HP1BP3Q5SSJ5 553 aaPredicted RBP21.17■□□□□ 0.98
VSX1-202ENST00000376709 GKAP1Q5VSY0 366 aaPredicted RBP21.17■□□□□ 0.98
VSX1-202ENST00000376709 TRNP1Q6NT89 227 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 PCGF5Q86SE9 256 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 TADA2BQ86TJ2 420 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 TTC30AQ86WT1 665 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.17■□□□□ 0.98
VSX1-202ENST00000376709 MCF2LO15068 1137 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 MYL3P08590 195 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 IFNAR2P48551 515 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 CTCFP49711 727 aaPredicted RBP21.17■□□□□ 0.98
VSX1-202ENST00000376709 LIG3P49916 1009 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 ATP11AP98196 1134 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 C9orf57Q5W0N0 161 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 CENPUQ71F23 418 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 ZBED8Q8IZ13 594 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 OTUD6BQ8N6M0 293 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 GGA2Q9UJY4 613 aa21.17■□□□□ 0.98
VSX1-202ENST00000376709 UBQLN1Q9UMX0 589 aaKnown RBP21.17■□□□□ 0.98
VSX1-202ENST00000376709 EXOC1LA0A1B0GW35 172 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 TMEM120BA0PK00 339 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 C5orf60A6NFR6 353 aa21.16■□□□□ 0.98
VSX1-202ENST00000376709 A8MXQ7 604 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms