RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 PLGP00747 810 aaPredicted RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 CFBP00751 764 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 CPA3P15088 417 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 RABIFP47224 123 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 HSPA13P48723 471 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 DHPSP49366 369 aaPredicted RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 TAP1Q03518 808 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 COL9A2Q14055 689 aaPredicted RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 HNRNPDQ14103 355 aaKnown RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 SPCS2Q15005 226 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 EZH2Q15910 746 aaKnown RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 ABCB5Q2M3G0 1257 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 TM4SF20Q53R12 229 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 KLHDC7AQ5VTJ3 777 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 HAUS3Q68CZ6 603 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 JMJD6Q6NYC1 403 aaPredicted RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 TRIM72Q6ZMU5 477 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 MACC1Q6ZN28 852 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 USP50Q70EL3 339 aaPredicted RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 ZNF654Q8IZM8 581 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 OR9A1PQ8NGU1 263 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 ZNF507Q8TCN5 953 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 CCDC28BQ9BUN5 200 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 WDR12Q9GZL7 423 aaKnown RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.29□□□□□ -1.08
USP48-203ENST00000374732 TM9SF3Q9HD45 589 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 VCX3AQ9NNX9 186 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 TBC1D29Q9UFV1 150 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 SLC7A8Q9UHI5 535 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 CAPN11Q9UMQ6 739 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 PIAS3Q9Y6X2 628 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 FRMPD2Q68DX3 1309 aaPredicted RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 KIF13BQ9NQT8 1826 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 DPPA5A6NC42 116 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 IDH3BO43837 385 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 RB1P06400 928 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 PTBP1P26599 531 aaKnown RBP eCLIP8.29□□□□□ -1.084e-15■■■□□ 16.4
USP48-203ENST00000374732 ZNF135P52742 658 aaPredicted RBP8.29□□□□□ -1.08
USP48-203ENST00000374732 SLC14A1Q13336 389 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 RIPK1Q13546 671 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 EPHA7Q15375 998 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 AOC3Q16853 763 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 CPLX4Q7Z7G2 160 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 FAM160B2Q86V87 743 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 C12orf56Q8IXR9 622 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 SEPT8Q92599 483 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 CCDC138Q96M89 665 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 EDEM2Q9BV94 578 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 BRIP1Q9BX63 1249 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 FBRSQ9HAH7 460 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 VPS51Q9UID3 782 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 SALL4Q9UJQ4 1053 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 PYCARDQ9ULZ3 195 aa8.29□□□□□ -1.08
USP48-203ENST00000374732 PI4KAP2A4QPH2 592 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 DPYSL4O14531 572 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 KCNQ3O43525 872 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 GAS8O95995 478 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 SYT1P21579 422 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 CTNNA2P26232 953 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 HSD17B4P51659 736 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 PRAMEP78395 509 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 CEBPZQ03701 1054 aaKnown RBP8.28□□□□□ -1.08
USP48-203ENST00000374732 GALNT1Q10472 559 aaPredicted RBP8.28□□□□□ -1.08
USP48-203ENST00000374732 COASYQ13057 564 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 C5orf22Q49AR2 442 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 DSG4Q86SJ6 1040 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 PI4KAP1Q8N8J0 262 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 CENPIQ92674 756 aaPredicted RBP8.28□□□□□ -1.08
USP48-203ENST00000374732 SYMPKQ92797 1274 aaKnown RBP8.28□□□□□ -1.08
USP48-203ENST00000374732 SLC10A4Q96EP9 437 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 CLIC6Q96NY7 704 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 NT5C1BQ96P26 610 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 ESYT1Q9BSJ8 1104 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 MOV10L1Q9BXT6 1211 aaKnown RBP8.28□□□□□ -1.08
USP48-203ENST00000374732 OSBPL1AQ9BXW6 950 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 MRPL47Q9HD33 250 aaKnown RBP8.28□□□□□ -1.08
USP48-203ENST00000374732 C19orf53Q9UNZ5 99 aaPredicted RBP8.28□□□□□ -1.08
USP48-203ENST00000374732 DNM3Q9UQ16 869 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 SSUH2Q9Y2M2 353 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 CACNG2Q9Y698 323 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 HEATR9A2RTY3 570 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 PPEF2O14830 753 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 PROM1O43490 865 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 MGRN1O60291 552 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 SYNCRIPO60506 623 aaKnown RBP8.28□□□□□ -1.08
USP48-203ENST00000374732 MAFO75444 373 aaPredicted RBP8.28□□□□□ -1.08
USP48-203ENST00000374732 SLU7O95391 586 aaKnown RBP8.28□□□□□ -1.08
USP48-203ENST00000374732 IGHMBP2P38935 993 aaKnown RBP8.28□□□□□ -1.08
USP48-203ENST00000374732 GRIK1P39086 918 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 ALDH1A3P47895 512 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 SLC12A3P55017 1021 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 GPX6P59796 221 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 PPP2R2BQ00005 443 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 CDK18Q07002 472 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 SYDE2Q5VT97 1194 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 NCAPH2Q6IBW4 605 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 ERICH5Q6P6B1 374 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 PDZD4Q76G19 769 aaPredicted RBP8.28□□□□□ -1.08
USP48-203ENST00000374732 RNF180Q86T96 592 aa8.28□□□□□ -1.08
USP48-203ENST00000374732 FAM228AQ86W67 206 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms