RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 PAQR9Q6ZVX9 377 aa15.23■□□□□ 0.03
UBXN11-207ENST00000374223 DPH6Q7L8W6 267 aa15.23■□□□□ 0.03
UBXN11-207ENST00000374223 RALGPS2Q86X27 583 aaPredicted RBP15.23■□□□□ 0.03
UBXN11-207ENST00000374223 C12orf56Q8IXR9 622 aa15.23■□□□□ 0.03
UBXN11-207ENST00000374223 MYCBPAPQ8TBZ2 947 aa15.23■□□□□ 0.03
UBXN11-207ENST00000374223 PARD3BQ8TEW8 1205 aa15.23■□□□□ 0.03
UBXN11-207ENST00000374223 MRPS31Q92665 395 aaKnown RBP15.23■□□□□ 0.03
UBXN11-207ENST00000374223 TRMT2BQ96GJ1 504 aaKnown RBP15.23■□□□□ 0.03
UBXN11-207ENST00000374223 FNBP1Q96RU3 617 aa15.23■□□□□ 0.03
UBXN11-207ENST00000374223 RNF38Q9H0F5 515 aa15.23■□□□□ 0.03
UBXN11-207ENST00000374223 HMGXB4Q9UGU5 601 aa15.23■□□□□ 0.03
UBXN11-207ENST00000374223 MAPK8IP1Q9UQF2 711 aa15.23■□□□□ 0.03
UBXN11-207ENST00000374223 MYO18AQ92614 2054 aaKnown RBP15.23■□□□□ 0.03
UBXN11-207ENST00000374223 CMA1P23946 247 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 MAGEA11P43364 429 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 GALK1P51570 392 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 MLLT6P55198 1093 aaPredicted RBP15.22■□□□□ 0.03
UBXN11-207ENST00000374223 MESP2Q0VG99 397 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 IFRD2Q12894 506 aaPredicted RBP15.22■□□□□ 0.03
UBXN11-207ENST00000374223 LAIR1Q6GTX8 287 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 C1orf228Q6PIY5 440 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 HS2ST1Q7LGA3 356 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 SFTPA1Q8IWL2 248 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 CEP57L1Q8IYX8 460 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 WBP2Q969T9 261 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 MSANTD3Q96H12 275 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 FUBP3Q96I24 572 aaKnown RBP eCLIP15.22■□□□□ 0.03
UBXN11-207ENST00000374223 CNTNAP3BQ96NU0 1288 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 KCNK16Q96T55 309 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 CNTNAP3Q9BZ76 1288 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 MAGEF1Q9HAY2 307 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 KIAA1586Q9HCI6 787 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 SPTBN2O15020 2390 aa15.22■□□□□ 0.03
UBXN11-207ENST00000374223 LRP3O75074 770 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 TACC1O75410 805 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 GJA4P35212 333 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 USP4Q13107 963 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 MTF1Q14872 753 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 GAB4Q2WGN9 574 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 SPEM1Q8N4L4 309 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 SPATA18Q8TC71 538 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 SH3RF2Q8TEC5 729 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 SPATA32Q96LK8 384 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 SNX25Q9H3E2 840 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 CFAP45Q9UL16 551 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 ABCA7Q8IZY2 2146 aa15.21■□□□□ 0.03
UBXN11-207ENST00000374223 BEST1O76090 585 aa15.2■□□□□ 0.02
UBXN11-207ENST00000374223 RPN1P04843 607 aaKnown RBP15.2■□□□□ 0.02
UBXN11-207ENST00000374223 CKMP06732 381 aa15.2■□□□□ 0.02
UBXN11-207ENST00000374223 DDX6P26196 483 aaKnown RBP eCLIP15.2■□□□□ 0.02
UBXN11-207ENST00000374223 BIRC3Q13489 604 aa15.2■□□□□ 0.02
UBXN11-207ENST00000374223 EML3Q32P44 896 aa15.2■□□□□ 0.02
UBXN11-207ENST00000374223 TMEM196Q5HYL7 178 aa15.2■□□□□ 0.02
UBXN11-207ENST00000374223 ATL3Q6DD88 541 aa15.2■□□□□ 0.02
UBXN11-207ENST00000374223 SCAMP5Q8TAC9 235 aa15.2■□□□□ 0.02
UBXN11-207ENST00000374223 SPATA17Q96L03 361 aa15.2■□□□□ 0.02
UBXN11-207ENST00000374223 ECT2Q9H8V3 914 aa15.2■□□□□ 0.02
UBXN11-207ENST00000374223 EXOC1Q9NV70 894 aa15.2■□□□□ 0.02
UBXN11-207ENST00000374223 THG1LQ9NWX6 298 aaKnown RBP15.2■□□□□ 0.02
UBXN11-207ENST00000374223 SMPD4Q9NXE4 827 aa15.2■□□□□ 0.02
UBXN11-207ENST00000374223 TRAV19A0A0A6YYK7 116 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 ZNF840PA6NDX5 716 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 A8MXQ7 604 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 PHACTR2O75167 634 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 NR3C1P04150 777 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 RETP07949 1114 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 HDCP19113 662 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 TNNC1P63316 161 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 CLDN10P78369 228 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 PLCB2Q00722 1185 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 FAM160A1Q05DH4 1040 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 SPEM2Q0P670 501 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 TAF10Q12962 218 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 TRPC3Q13507 836 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 ZNF268Q14587 947 aaPredicted RBP15.19■□□□□ 0.02
UBXN11-207ENST00000374223 C4orf50Q6ZRC1 276 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 PRR23BQ6ZRT6 265 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 DENND5BQ6ZUT9 1274 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 SMYD4Q8IYR2 804 aaPredicted RBP15.19■□□□□ 0.02
UBXN11-207ENST00000374223 FSIP1Q8NA03 581 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 B3GALNT2Q8NCR0 500 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 ZMIZ2Q8NF64 920 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 NETO1Q8TDF5 533 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 EEF2KMTQ96G04 330 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 TWNKQ96RR1 684 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 TTLL2Q9BWV7 592 aa15.19■□□□□ 0.02
UBXN11-207ENST00000374223 DUS2Q9NX74 493 aaKnown RBP15.19■□□□□ 0.02
UBXN11-207ENST00000374223 UXTQ9UBK9 157 aaPredicted RBP15.19■□□□□ 0.02
UBXN11-207ENST00000374223 R3HCC1Q9Y3T6 440 aaKnown RBP15.19■□□□□ 0.02
UBXN11-207ENST00000374223 FAM237AA0A1B0GTK4 181 aa15.18■□□□□ 0.02
UBXN11-207ENST00000374223 LEFTY2O00292 366 aa15.18■□□□□ 0.02
UBXN11-207ENST00000374223 TRDMT1O14717 391 aaKnown RBP15.18■□□□□ 0.02
UBXN11-207ENST00000374223 RNF40O75150 1001 aa15.18■□□□□ 0.02
UBXN11-207ENST00000374223 STAU1O95793 577 aaKnown RBP15.18■□□□□ 0.02
UBXN11-207ENST00000374223 ABL1P00519 1130 aa15.18■□□□□ 0.02
UBXN11-207ENST00000374223 USP17L7P0C7H9 530 aa15.18■□□□□ 0.02
UBXN11-207ENST00000374223 TRIM49P0CI25 452 aa15.18■□□□□ 0.02
UBXN11-207ENST00000374223 TRIM49CP0CI26 452 aa15.18■□□□□ 0.02
UBXN11-207ENST00000374223 CCDC130P13994 396 aa15.18■□□□□ 0.02
UBXN11-207ENST00000374223 CNR2P34972 360 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms