RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 CLASP2O75122 1294 aaKnown RBP14.86□□□□□ -0.03
TRAF1-201ENST00000373887 CDH18Q13634 790 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 DTNBP1Q96EV8 351 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 SLITRK1Q96PX8 696 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 SPATC1LQ9H0A9 340 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 MPP6Q9NZW5 540 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 SMG5Q9UPR3 1016 aaKnown RBP14.86□□□□□ -0.03
TRAF1-201ENST00000373887 USP1O94782 785 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 FAM200BP0CF97 657 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 DNAJB3Q8WWF6 145 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 ELMO3Q96BJ8 720 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 TADA1Q96BN2 335 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 TBKBP1A7MCY6 615 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 SRLQ86TD4 932 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 KRT78Q8N1N4 520 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 ZNF786Q8N393 782 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 PCDHB8Q9UN66 801 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 MED24O75448 989 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 PTPN7P35236 360 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 PPP4CP60510 307 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 TP53BP2Q13625 1128 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 SLC44A2Q8IWA5 706 aaPredicted RBP14.85□□□□□ -0.03
TRAF1-201ENST00000373887 AGGF1Q8N302 714 aaeCLIP14.85□□□□□ -0.03
TRAF1-201ENST00000373887 SEC16BQ96JE7 1060 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 WDR24Q96S15 920 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 POP1Q99575 1024 aaKnown RBP14.85□□□□□ -0.03
TRAF1-201ENST00000373887 ALDH8A1Q9H2A2 487 aaPredicted RBP14.85□□□□□ -0.03
TRAF1-201ENST00000373887 SEPT3Q9UH03 358 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 TIMM13Q9Y5L4 95 aaPredicted RBP14.85□□□□□ -0.03
TRAF1-201ENST00000373887 KIAA0391O15091 583 aaKnown RBP14.85□□□□□ -0.03
TRAF1-201ENST00000373887 PYGMP11217 842 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 CDC16Q13042 620 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 BFSP2Q13515 415 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 CYLC2Q14093 348 aaPredicted RBP14.85□□□□□ -0.03
TRAF1-201ENST00000373887 CHI3L2Q15782 390 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 TTC33Q6PID6 262 aaPredicted RBP14.85□□□□□ -0.03
TRAF1-201ENST00000373887 ACOT1Q86TX2 421 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 ARHGEF26Q96DR7 871 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 SMNDC1O75940 238 aaKnown RBP eCLIP14.85□□□□□ -0.03
TRAF1-201ENST00000373887 UCHL3P15374 230 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 RPA1P27694 616 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 PRKCQQ04759 706 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 CCT8L2Q96SF2 557 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 CHP1Q99653 195 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 ZDHHC9Q9Y397 364 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 PPP1R37O75864 691 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 MAP3K6O95382 1288 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 SUPT20HL2P0C7V6 817 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 RAG1P15918 1043 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 CHRM3P20309 590 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 CMTM5Q96DZ9 223 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 KIF2CQ99661 725 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 STK33Q9BYT3 514 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 MKL2Q9ULH7 1088 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 PREX1Q8TCU6 1659 aa14.85□□□□□ -0.03
TRAF1-201ENST00000373887 A0A087WZ62 844 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 F8W810 466 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 KIF1CO43896 1103 aaKnown RBP14.84□□□□□ -0.03
TRAF1-201ENST00000373887 ALBP02768 609 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 ACO1P21399 889 aaKnown RBP14.84□□□□□ -0.03
TRAF1-201ENST00000373887 ADORA2AP29274 412 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 BEX3Q00994 111 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 KRT77Q7Z794 578 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 CARNMT1Q8N4J0 409 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 PCSK9Q8NBP7 692 aaKnown RBP14.84□□□□□ -0.03
TRAF1-201ENST00000373887 FDXACB1Q9BRP7 624 aaPredicted RBP14.84□□□□□ -0.03
TRAF1-201ENST00000373887 SPATA16Q9BXB7 569 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 RNF208Q9H0X6 261 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 KRT16P08779 473 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 SLC1A1P43005 524 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 CTXN3Q4LDR2 81 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 WLSQ5T9L3 541 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 POTEAQ6S8J7 498 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 CCDC149Q6ZUS6 474 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 P2RX7Q99572 595 aaKnown RBP14.84□□□□□ -0.03
TRAF1-201ENST00000373887 BPIFA3Q9BQP9 254 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 RNF19AQ9NV58 838 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 DLGAP2Q9P1A6 1054 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 CYB561D2O14569 222 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 AP1G2O75843 785 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 KLHL18O94889 574 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 NME5P56597 212 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 TRIM16LQ309B1 348 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 TTC39BQ5VTQ0 682 aaPredicted RBP14.84□□□□□ -0.03
TRAF1-201ENST00000373887 ARMC6Q6NXE6 501 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 GLMNQ92990 594 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 TRIM10Q9UDY6 481 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 CTDNEP1O95476 244 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 FDPSP14324 419 aaKnown RBP14.84□□□□□ -0.03
TRAF1-201ENST00000373887 IGFBP4P22692 258 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 SHROOM1Q2M3G4 852 aaPredicted RBP14.84□□□□□ -0.03
TRAF1-201ENST00000373887 ADSSL1Q8N142 457 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 IMPAD1Q9NX62 359 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 INO80Q9ULG1 1556 aaPredicted RBP14.84□□□□□ -0.03
TRAF1-201ENST00000373887 MYL4P12829 197 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 GALCP54803 685 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 NLRP9Q7RTR0 991 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 TMC7Q7Z402 723 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 GPC2Q8N158 579 aa14.84□□□□□ -0.03
TRAF1-201ENST00000373887 TRAPPC12Q8WVT3 735 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms