RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 TRMT11Q7Z4G4 463 aaKnown RBP15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 RAB44Q7Z6P3 723 aaPredicted RBP15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 STKLD1Q8NE28 680 aa15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 RLN3Q8WXF3 142 aa15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 CEP295NLQ96MC4 621 aa15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 FNBP1Q96RU3 617 aa15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 CYP2S1Q96SQ9 504 aa15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 PNKPQ96T60 521 aa15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 TMLHEQ9NVH6 421 aa15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 DDX43Q9NXZ2 648 aaKnown RBP15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 GCNT4Q9P109 453 aa15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 AGO2Q9UKV8 859 aaKnown RBP15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 GPSM3Q9Y4H4 160 aa15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 PCDHB9Q9Y5E1 797 aa15.91■□□□□ 0.14
CDKN1A-202ENST00000373711 ACACAQ13085 2346 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 PCDH15Q96QU1 1955 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 ZBTB24O43167 697 aaPredicted RBP15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 TRAK2O60296 914 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 TBCAO75347 108 aaKnown RBP15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 ADH1CP00326 375 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 KRT18P05783 430 aaKnown RBP15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 CYP2F1P24903 491 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 RESTQ13127 1097 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 SLC14A1Q13336 389 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 TMEM92Q6UXU6 159 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 C4orf50Q6ZRC1 276 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 NUDT18Q6ZVK8 323 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 PDZD3Q86UT5 571 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 SCN4BQ8IWT1 228 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 PDCL2Q8N4E4 241 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 CHCHD4Q8N4Q1 142 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 ALLCQ8N6M5 410 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 IL17RCQ8NAC3 791 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 HMGB4Q8WW32 186 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 INTS4Q96HW7 963 aaKnown RBP15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 PNMA5Q96PV4 448 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 SLC22A12Q96S37 553 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 REEP2Q9BRK0 252 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 TMEM74BQ9NUR3 256 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 FREM2Q5SZK8 3169 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 ATXN2Q99700 1313 aaKnown RBP15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 MYOFQ9NZM1 2061 aa15.9■□□□□ 0.14
CDKN1A-202ENST00000373711 NPHP3-ACAD11A0A0J9YXS1 232 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 TCRBV21S2A2A0A5A6 115 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 C2orf78A6NCI8 922 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 KAT7O95251 611 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 ITPKAP23677 461 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 TIE1P35590 1138 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 MAGEA11P43364 429 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 PPP3CCP48454 512 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 LHX1P48742 406 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 TOB1P50616 345 aaPredicted RBP15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 ZNF131P52739 623 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 RPL6Q02878 288 aaKnown RBP15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 POSTNQ15063 836 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 MAP7D1Q3KQU3 841 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 GPBP1Q86WP2 473 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 DDX42Q86XP3 938 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 MINDY1Q8N5J2 469 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 CACTINQ8WUQ7 758 aaKnown RBP15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 CALML4Q96GE6 196 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 PLIN2Q99541 437 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 LINC00597Q9H2U6 94 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 CCDC86Q9H6F5 360 aaKnown RBP15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 TRPM5Q9NZQ8 1165 aa15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 R3HCC1Q9Y3T6 440 aaKnown RBP15.89■□□□□ 0.13
CDKN1A-202ENST00000373711 SGK1O00141 431 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 LEFTY2O00292 366 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 CYP17A1P05093 508 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 HSP90AA1P07900 732 aaKnown RBP15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 ANXA13P27216 316 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 GRIA2P42262 883 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 TNFRSF4P43489 277 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 ATP2C1P98194 919 aaPredicted RBP15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 GTF2BQ00403 316 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 SCAPQ12770 1279 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 MAPRE1Q15691 268 aaKnown RBP15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 IL17AQ16552 155 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 TMEM119Q4V9L6 283 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 ZC2HC1CQ53FD0 456 aaPredicted RBP15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 RILPL1Q5EBL4 403 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 SLC39A4Q6P5W5 647 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 FILIP1Q7Z7B0 1213 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 LRRC52Q8N7C0 313 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 KCNV2Q8TDN2 545 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 SPATA17Q96L03 361 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 ZHX3Q9H4I2 956 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 CAPN10Q9HC96 672 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 ARHGEF4Q9NR80 690 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 SUSD2Q9UGT4 822 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 MBD1Q9UIS9 605 aaPredicted RBP15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 GTF3C4Q9UKN8 822 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 L1RE1Q9UN81 338 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 SMC3Q9UQE7 1217 aa15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 GCN1Q92616 2671 aaKnown RBP15.88■□□□□ 0.13
CDKN1A-202ENST00000373711 VWA3AA6NCI4 1184 aa15.87■□□□□ 0.13
CDKN1A-202ENST00000373711 ARHGAP33O14559 1287 aa15.87■□□□□ 0.13
CDKN1A-202ENST00000373711 GJB2P29033 226 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms