RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 PIAS3Q9Y6X2 628 aa8.26□□□□□ -1.09
SP140-202ENST00000373645 FAM208BQ5VWN6 2430 aa8.26□□□□□ -1.09
SP140-202ENST00000373645 BAHCC1Q9P281 2608 aa8.26□□□□□ -1.09
SP140-202ENST00000373645 ATRXP46100 2492 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 SPAG17Q6Q759 2223 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 ZFYVE26Q68DK2 2539 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 SMIM28A0A1B0GU29 152 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 ARHGEF37A1IGU5 675 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 TMEM189-UBE2V1I3L0A0 370 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 K7ESF4 209 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 PRRG1O14668 218 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 NCAM2O15394 837 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 PHACTR2O75167 634 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 RETP07949 1114 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 CDC25BP30305 580 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 MXI1P50539 228 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 TFAMQ00059 246 aaKnown RBP8.25□□□□□ -1.09
SP140-202ENST00000373645 MYL7Q01449 175 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 KCNMA1Q12791 1236 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 ELAVL2Q12926 359 aaKnown RBP8.25□□□□□ -1.09
SP140-202ENST00000373645 SIM2Q14190 667 aaPredicted RBP8.25□□□□□ -1.09
SP140-202ENST00000373645 TMEM132DQ14C87 1099 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 SF3A2Q15428 464 aaKnown RBP8.25□□□□□ -1.09
SP140-202ENST00000373645 SYCP1Q15431 976 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 ZBTB6Q15916 424 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 UPP1Q16831 310 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 EXOC3L4Q17RC7 722 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 ZACNQ401N2 412 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 STXBP5Q5T5C0 1151 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 LMBRD2Q68DH5 695 aaPredicted RBP8.25□□□□□ -1.09
SP140-202ENST00000373645 SLC8B1Q6J4K2 584 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 TRAPPC11Q7Z392 1133 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 EFCAB13Q8IY85 973 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 FAM160A2Q8N612 972 aaPredicted RBP8.25□□□□□ -1.09
SP140-202ENST00000373645 EHBP1Q8NDI1 1231 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 FBXL13Q8NEE6 735 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 BEST2Q8NFU1 509 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 OR5B17Q8NGF7 314 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 TTC8Q8TAM2 541 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 ZMAT2Q96NC0 199 aaKnown RBP8.25□□□□□ -1.09
SP140-202ENST00000373645 NELL2Q99435 816 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 CRACR2AQ9BSW2 395 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 TRMT61BQ9BVS5 477 aaKnown RBP8.25□□□□□ -1.09
SP140-202ENST00000373645 FAM126AQ9BYI3 521 aaPredicted RBP8.25□□□□□ -1.09
SP140-202ENST00000373645 ZFP14Q9HCL3 533 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 RAB20Q9NX57 234 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 CEP72Q9P209 647 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 RAB23Q9ULC3 237 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 UBQLN1Q9UMX0 589 aaKnown RBP8.25□□□□□ -1.09
SP140-202ENST00000373645 SIK3Q9Y2K2 1263 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 MRPS17Q9Y2R5 130 aaKnown RBP8.25□□□□□ -1.09
SP140-202ENST00000373645 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.25□□□□□ -1.09
SP140-202ENST00000373645 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.25□□□□□ -1.09
SP140-202ENST00000373645 BACE2Q9Y5Z0 518 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 IGF2RP11717 2491 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 ATG2BQ96BY7 2078 aa8.25□□□□□ -1.09
SP140-202ENST00000373645 SLC38A8A6NNN8 435 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 TK2O00142 265 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 ABLIM3O94929 683 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 VNN1O95497 513 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 VNN2O95498 520 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 CST3P01034 146 aaPredicted RBP8.24□□□□□ -1.09
SP140-202ENST00000373645 LRG1P02750 347 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 NFICP08651 508 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 MYL4P12829 197 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 PTPN2P17706 415 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 SLC9A1P19634 815 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 CYP3A5P20815 502 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 PON1P27169 355 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 PMLP29590 882 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 PXNP49023 591 aaPredicted RBP8.24□□□□□ -1.09
SP140-202ENST00000373645 CCR3P51677 355 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 CDR1P51861 262 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 BIRC3Q13489 604 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 TRPC3Q13507 836 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 TEAD2Q15562 447 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 CSRP2Q16527 193 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 N4BP2L1Q5TBK1 243 aaPredicted RBP8.24□□□□□ -1.09
SP140-202ENST00000373645 TDRD10Q5VZ19 366 aaKnown RBP8.24□□□□□ -1.09
SP140-202ENST00000373645 SPECC1LQ69YQ0 1117 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 PKN3Q6P5Z2 889 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 ANKS3Q6ZW76 656 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 VSTM4Q8IW00 320 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 DRC7Q8IY82 874 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 CELF5Q8N6W0 485 aaKnown RBP8.24□□□□□ -1.09
SP140-202ENST00000373645 C1orf127Q8N9H9 656 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 ZNF461Q8TAF7 563 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 LMO3Q8TAP4 145 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 ZSCAN18Q8TBC5 510 aaPredicted RBP8.24□□□□□ -1.09
SP140-202ENST00000373645 C18orf25Q96B23 403 aaPredicted RBP8.24□□□□□ -1.09
SP140-202ENST00000373645 IQCDQ96DY2 449 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 ZFYVE19Q96K21 471 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 PCMTD1Q96MG8 357 aaPredicted RBP8.24□□□□□ -1.09
SP140-202ENST00000373645 LRRC3BQ96PB8 259 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 NUP58Q9BVL2 599 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 MTMR12Q9C0I1 747 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 INTS2Q9H0H0 1204 aaKnown RBP8.24□□□□□ -1.09
SP140-202ENST00000373645 CYP4F11Q9HBI6 524 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 PLCB1Q9NQ66 1216 aa8.24□□□□□ -1.09
SP140-202ENST00000373645 AVENQ9NQS1 362 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms