RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 NPLOC4Q8TAT6 608 aa19.65■□□□□ 0.74
USP49-202ENST00000373010 RXFP2Q8WXD0 754 aa19.65■□□□□ 0.74
USP49-202ENST00000373010 EIF2AQ9BY44 585 aaKnown RBP19.65■□□□□ 0.74
USP49-202ENST00000373010 ASNSD1Q9NWL6 643 aa19.65■□□□□ 0.74
USP49-202ENST00000373010 HES2Q9Y543 173 aa19.65■□□□□ 0.74
USP49-202ENST00000373010 EXOC1LA0A1B0GW35 172 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 GPD1P21695 349 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 GCAP28676 217 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 ZNF143P52747 638 aaPredicted RBP19.64■□□□□ 0.74
USP49-202ENST00000373010 GRB14Q14449 540 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 CDO1Q16878 200 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 CCDC142Q17RM4 750 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 ZNF410Q86VK4 478 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 UNC45BQ8IWX7 931 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 CCDC13Q8IYE1 715 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 TTC13Q8NBP0 860 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 GDAP1Q8TB36 358 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 ELAC2Q9BQ52 826 aaKnown RBP19.64■□□□□ 0.74
USP49-202ENST00000373010 TINF2Q9BSI4 451 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 ADAMTS10Q9H324 1103 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 VPS37BQ9H9H4 285 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 SHOC2Q9UQ13 582 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 SLC45A1Q9Y2W3 748 aa19.64■□□□□ 0.74
USP49-202ENST00000373010 PCNTO95613 3336 aa19.64■□□□□ 0.73
USP49-202ENST00000373010 FSBPO95073 299 aa19.64■□□□□ 0.73
USP49-202ENST00000373010 STAU1O95793 577 aaKnown RBP19.64■□□□□ 0.73
USP49-202ENST00000373010 HOXD8P13378 290 aaPredicted RBP19.64■□□□□ 0.73
USP49-202ENST00000373010 PDGFRAP16234 1089 aa19.64■□□□□ 0.73
USP49-202ENST00000373010 CTCFP49711 727 aaPredicted RBP19.64■□□□□ 0.73
USP49-202ENST00000373010 PDIA2Q13087 525 aaKnown RBP19.64■□□□□ 0.73
USP49-202ENST00000373010 PPP1R26Q5T8A7 1209 aaPredicted RBP19.64■□□□□ 0.73
USP49-202ENST00000373010 PIGWQ7Z7B1 504 aa19.64■□□□□ 0.73
USP49-202ENST00000373010 ACOT1Q86TX2 421 aa19.64■□□□□ 0.73
USP49-202ENST00000373010 ANKMY2Q8IV38 441 aa19.64■□□□□ 0.73
USP49-202ENST00000373010 CCDC197Q8NCU1 140 aa19.64■□□□□ 0.73
USP49-202ENST00000373010 RSAD2Q8WXG1 361 aa19.64■□□□□ 0.73
USP49-202ENST00000373010 TUBGCP4Q9UGJ1 667 aa19.64■□□□□ 0.73
USP49-202ENST00000373010 FARP1Q9Y4F1 1045 aaPredicted RBP19.64■□□□□ 0.73
USP49-202ENST00000373010 NME7Q9Y5B8 376 aa19.64■□□□□ 0.73
USP49-202ENST00000373010 SNX9Q9Y5X1 595 aa19.64■□□□□ 0.73
USP49-202ENST00000373010 GOLGA6L7A0A1B0GV03 622 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 C2CD4BA6NLJ0 364 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 POC1B-GALNT4F8VUJ3 575 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 RPL22P35268 128 aaKnown RBP19.63■□□□□ 0.73
USP49-202ENST00000373010 NRLP54845 237 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 GLRA4Q5JXX5 417 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 FAM182AQ5T1J6 154 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 NPNTQ6UXI9 565 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 CYP4V2Q6ZWL3 525 aaPredicted RBP19.63■□□□□ 0.73
USP49-202ENST00000373010 CATSPER4Q7RTX7 472 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 ANKRD23Q86SG2 305 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 CPT1BQ92523 772 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 MAML1Q92585 1016 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 C18orf25Q96B23 403 aaPredicted RBP19.63■□□□□ 0.73
USP49-202ENST00000373010 LPIN3Q9BQK8 851 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 FAM49BQ9NUQ9 324 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 ALOX15BO15296 676 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 EIF3EP60228 445 aaKnown RBP19.63■□□□□ 0.73
USP49-202ENST00000373010 ACAP1Q15027 740 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 DCAF4L1Q3SXM0 396 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 PRAMEF19Q5SWL8 479 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 FBXW10Q5XX13 1052 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 CENPUQ71F23 418 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 NT5DC4Q86YG4 428 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 TTC25Q96NG3 672 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 CNPY3Q9BT09 278 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 ABHD16BQ9H3Z7 469 aa19.63■□□□□ 0.73
USP49-202ENST00000373010 GBA2Q9HCG7 927 aaPredicted RBP19.63■□□□□ 0.73
USP49-202ENST00000373010 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.63■□□□□ 0.73
USP49-202ENST00000373010 TCP11X1B4DZS4 312 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 ATP2C2O75185 946 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 CDH6P55285 790 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 MTM1Q13496 603 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 PMF1Q6P1K2 205 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 PLEKHH3Q7Z736 793 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 FAM71DQ8N9W8 422 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 MRRFQ96E11 262 aaKnown RBP19.62■□□□□ 0.73
USP49-202ENST00000373010 OSMRQ99650 979 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 KIAA1257Q9ULG3 409 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 RASA4BC9J798 803 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 APOC4-APOC2K7ER74 178 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 DNM1LO00429 736 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 DYNC1LI2O43237 492 aaPredicted RBP19.62■□□□□ 0.73
USP49-202ENST00000373010 RASA4O43374 803 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 APOC2P02655 101 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 PCK1P35558 622 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 ATP11AP98196 1134 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 ACTN3Q08043 901 aaPredicted RBP19.62■□□□□ 0.73
USP49-202ENST00000373010 MSS51Q4VC12 460 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 FNBP1LQ5T0N5 605 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 TTC30AQ86WT1 665 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 PPIL6Q8IXY8 311 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 SNX27Q96L92 541 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 FRMD8P1Q9BZ68 369 aaPredicted RBP19.62■□□□□ 0.73
USP49-202ENST00000373010 SAMD15Q9P1V8 674 aa19.62■□□□□ 0.73
USP49-202ENST00000373010 SCN4AP35499 1836 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 TCRBV7S3A2A0A539 114 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 GPR32O75388 356 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 HIF1AQ16665 826 aa19.61■□□□□ 0.73
USP49-202ENST00000373010 CCT6BQ92526 530 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms