RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 ERVFC1P60507 584 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 UBE3AQ05086 875 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 GRIN2CQ14957 1233 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 CLUL1Q15846 466 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 TRIM72Q6ZMU5 477 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 CEP57Q86XR8 500 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 UBR7Q8N806 425 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 CPA5Q8WXQ8 436 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 TRIM11Q96F44 468 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 GDAP1L1Q96MZ0 367 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 NAP1L3Q99457 506 aaPredicted RBP16.94■□□□□ 0.3
C9orf78-201ENST00000372447 ZSWIM1Q9BR11 485 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 CHST7Q9NS84 486 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 HPCAL4Q9UM19 191 aa16.94■□□□□ 0.3
C9orf78-201ENST00000372447 TIMM13Q9Y5L4 95 aaPredicted RBP16.94■□□□□ 0.3
C9orf78-201ENST00000372447 H3BQF6 201 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 FGFR3P22607 806 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 NSFP46459 744 aaKnown RBP16.93■□□□□ 0.3
C9orf78-201ENST00000372447 CENPCQ03188 943 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 USP41Q3LFD5 358 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 RTP2Q5QGT7 225 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 ZNF697Q5TEC3 545 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 NAA35Q5VZE5 725 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 EMBQ6PCB8 327 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 CD101Q93033 1021 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 CYFIP2Q96F07 1278 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 BTBD6Q96KE9 485 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 FAM161BQ96MY7 647 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 PRDM12Q9H4Q4 367 aa16.93■□□□□ 0.3
C9orf78-201ENST00000372447 AVENQ9NQS1 362 aaPredicted RBP16.93■□□□□ 0.3
C9orf78-201ENST00000372447 NXF1Q9UBU9 619 aaKnown RBP16.93■□□□□ 0.3
C9orf78-201ENST00000372447 ZSCAN5CA6NGD5 496 aaPredicted RBP16.92■□□□□ 0.3
C9orf78-201ENST00000372447 SART1O43290 800 aaKnown RBP16.92■□□□□ 0.3
C9orf78-201ENST00000372447 CSPG5O95196 566 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 ZNF132P52740 706 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 SOWAHAQ2M3V2 549 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 ZNF667Q5HYK9 610 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 SND1Q7KZF4 910 aaKnown RBP eCLIP16.92■□□□□ 0.3
C9orf78-201ENST00000372447 KRT35Q92764 455 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 TTPALQ9BTX7 342 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 HERC2P3Q9BVR0 1158 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 NIF3L1Q9GZT8 377 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 ZBP1Q9H171 429 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 PLEKHA4Q9H4M7 779 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 TLR9Q9NR96 1032 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 STK39Q9UEW8 545 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 PCDHB8Q9UN66 801 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 POLIQ9UNA4 740 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 PLXNA4Q9HCM2 1894 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 TRANK1O15050 2925 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 ESYT3A0FGR9 886 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 SYN3O14994 580 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 POLR3GO15318 223 aaPredicted RBP16.92■□□□□ 0.3
C9orf78-201ENST00000372447 IRS1P35568 1242 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 CARSP49589 748 aaKnown RBP16.92■□□□□ 0.3
C9orf78-201ENST00000372447 PEX5P50542 639 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 ZNF211Q13398 564 aaPredicted RBP16.92■□□□□ 0.3
C9orf78-201ENST00000372447 KIAA0319Q5VV43 1072 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 WSCD1Q658N2 575 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 GPR153Q6NV75 609 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 TMC7Q7Z402 723 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 LIMS2Q7Z4I7 341 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 CASKIN2Q8WXE0 1202 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 AUTS2Q8WXX7 1259 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 CAVIN3Q969G5 261 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 TCF25Q9BQ70 676 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 DDX47Q9H0S4 455 aaKnown RBP16.92■□□□□ 0.3
C9orf78-201ENST00000372447 SLITRK6Q9H5Y7 841 aa16.92■□□□□ 0.3
C9orf78-201ENST00000372447 CCDC66A2RUB6 948 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 C2CD2LO14523 706 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 THAP12O43422 761 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 SPOPO43791 374 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 HUS1O60921 280 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 CYP11A1P05108 521 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 CFHP08603 1231 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 CTSAP10619 480 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 ODC1P11926 461 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 RRM1P23921 792 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 CTNNA2P26232 953 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 CTNNA1P35221 906 aaKnown RBP16.91■□□□□ 0.3
C9orf78-201ENST00000372447 MARCKSL1P49006 195 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 GLUD2P49448 558 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 NOMO3P69849 1222 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 DSG1Q02413 1049 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 NNTQ13423 1086 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 KIAA1841Q6NSI8 718 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 PPP1R2P3Q6NXS1 205 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 MON1BQ7L1V2 547 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 TOP6BLQ8N6T0 577 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 APPL2Q8NEU8 664 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 IFT81Q8WYA0 676 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 MYO7AQ13402 2215 aa16.91■□□□□ 0.3
C9orf78-201ENST00000372447 GOLGA6L10A0A0M3HER8 536 aa16.9■□□□□ 0.3
C9orf78-201ENST00000372447 FSCN2O14926 492 aa16.9■□□□□ 0.3
C9orf78-201ENST00000372447 LILRB3O75022 631 aa16.9■□□□□ 0.3
C9orf78-201ENST00000372447 TYMPP19971 482 aa16.9■□□□□ 0.3
C9orf78-201ENST00000372447 ASPAP45381 313 aa16.9■□□□□ 0.3
C9orf78-201ENST00000372447 MRPL58Q14197 206 aaKnown RBP16.9■□□□□ 0.3
C9orf78-201ENST00000372447 PPP2R5EQ16537 467 aa16.9■□□□□ 0.3
C9orf78-201ENST00000372447 HSP90B2PQ58FF3 399 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms