RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 BCS1LQ9Y276 419 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 COQ6Q9Y2Z9 468 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 MYH4Q9Y623 1939 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 KDM3AQ9Y4C1 1321 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 A0A1W2PQ67 120 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 TNFRSF21O75509 655 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 DCTN3O75935 186 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 APOEP02649 317 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 SMIM18P0DKX4 95 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 MAGEA1P43355 309 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 RPL5P46777 297 aaKnown RBP9.26□□□□□ -0.93
ATG4A-203ENST00000372232 SNAP25P60880 206 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 KCNMA1Q12791 1236 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 RRP1BQ14684 758 aaKnown RBP9.26□□□□□ -0.93
ATG4A-203ENST00000372232 NR1D2Q14995 579 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 C21orf62-AS1Q17RA5 79 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 DENND2CQ68D51 928 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 BORAQ6PGQ7 559 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 FOXR2Q6PJQ5 311 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 GLIS3Q8NEA6 775 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 STMN2Q93045 179 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 LRRC37BQ96QE4 947 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 FNBP1Q96RU3 617 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 PRPF18Q99633 342 aaKnown RBP9.26□□□□□ -0.93
ATG4A-203ENST00000372232 ARHGAP20Q9P2F6 1191 aa9.26□□□□□ -0.93
ATG4A-203ENST00000372232 UTP11Q9Y3A2 253 aaKnown RBP9.26□□□□□ -0.93
ATG4A-203ENST00000372232 ARHGAP10A1A4S6 786 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 TMEM114B3SHH9 223 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 CCDC188H7C350 402 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 SMAD7O15105 426 aaKnown RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 MAPK13O15264 365 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 SLC26A4O43511 780 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 PLEKP08567 350 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 EIF4A3P38919 411 aaKnown RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 ACADSBP45954 432 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 TUFMP49411 452 aaKnown RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 MXI1P50539 228 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 RPL26P61254 145 aaKnown RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 CDC16Q13042 620 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 COASYQ13057 564 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 LRRC41Q15345 812 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 CYTH1Q15438 398 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 MFSD5Q6N075 450 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 MAMSTRQ6ZN01 415 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 LRRC55Q6ZSA7 311 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 VPS36Q86VN1 386 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 FBXO11Q86XK2 927 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 SLFN12Q8IYM2 578 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 ACTRT1Q8TDG2 376 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 UIMC1Q96RL1 719 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 FMO2Q99518 471 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 MIPEPQ99797 713 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 SLITRK6Q9H5Y7 841 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 RPAP3Q9H6T3 665 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 VTA1Q9NP79 307 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 ZMAT5Q9UDW3 170 aaKnown RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 DNAJB4Q9UDY4 337 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 PLAGL2Q9UPG8 496 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 ABCB11O95342 1321 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 A0A1W2PRG0 241 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 ANKRD34BA5PLL1 514 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 A8MXQ7 604 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 E9PMD0 336 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 HGSO14964 777 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 FBXO24O75426 580 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 TRMUO75648 421 aaKnown RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 BMP3P12645 472 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 PHBP35232 272 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 SOX9P48436 509 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 GPC3P51654 580 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 RPS3AP61247 264 aaKnown RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 CDR2Q01850 454 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 IKQ13123 557 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 SEPT6Q14141 434 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 SPCS2Q15005 226 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 FYB2Q5VWT5 728 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 PDXDC1Q6P996 788 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 FBXL19Q6PCT2 694 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 ETNPPLQ8TBG4 499 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 ZNF296Q8WUU4 475 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 PRPF31Q8WWY3 499 aaKnown RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 CADM1Q9BY67 442 aaKnown RBP9.25□□□□□ -0.93
ATG4A-203ENST00000372232 KLHL4Q9C0H6 718 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 SAR1AQ9NR31 198 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 UVRAGQ9P2Y5 699 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 WASF2Q9Y6W5 498 aa9.25□□□□□ -0.93
ATG4A-203ENST00000372232 COL2A1P02458 1487 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-203ENST00000372232 ZNF646O15015 1829 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-203ENST00000372232 POTEB3A0JP26 581 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 SERTM1A2A2V5 107 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 SOBPA7XYQ1 873 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 POTECB2RU33 542 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 TBX3O15119 743 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 KMOO15229 486 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 CNOT3O75175 753 aaKnown RBP9.24□□□□□ -0.93
ATG4A-203ENST00000372232 PALMO75781 387 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 FOSP01100 380 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-203ENST00000372232 PLA2G4BP0C869 781 aa9.24□□□□□ -0.93
ATG4A-203ENST00000372232 PABPC1P11940 636 aaKnown RBP9.24□□□□□ -0.93
ATG4A-203ENST00000372232 PCSK6P29122 969 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms