RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 PLEKHA5Q9HAU0 1116 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 KCNQ5Q9NR82 932 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 RAB6BQ9NRW1 208 aa12.25□□□□□ -0.45
PTPN1-201ENST00000371621 ZC3H7BQ9UGR2 993 aaKnown RBP12.25□□□□□ -0.45
PTPN1-201ENST00000371621 HEMK1Q9Y5R4 338 aaPredicted RBP12.25□□□□□ -0.45
PTPN1-201ENST00000371621 ARHGEF9O43307 516 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 SORBS3O60504 671 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 OXCT1P55809 520 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 GNA12Q03113 381 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 FSTL1Q12841 308 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 KIF19Q2TAC6 998 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 GALNTL6Q49A17 601 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 C3orf67Q6ZVT6 689 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 ELMO1Q92556 727 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 PTPRUQ92729 1446 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 CCDC78A2IDD5 438 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 SLC37A4O43826 429 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 SNRPAP09012 282 aaKnown RBP12.24□□□□□ -0.45
PTPN1-201ENST00000371621 GTF2IP78347 998 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 MGAT5Q09328 741 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 BST1Q10588 318 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 NME3Q13232 169 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 PAOXQ6QHF9 649 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 ZDHHC24Q6UX98 284 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 ZNF572Q7Z3I7 529 aaPredicted RBP12.24□□□□□ -0.45
PTPN1-201ENST00000371621 FBXL16Q8N461 479 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 GLMNQ92990 594 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 MRPS26Q9BYN8 205 aaKnown RBP12.24□□□□□ -0.45
PTPN1-201ENST00000371621 RPL26L1Q9UNX3 145 aaKnown RBP12.24□□□□□ -0.45
PTPN1-201ENST00000371621 KNDC1Q76NI1 1749 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 PSMD11O00231 422 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 ZBED1O96006 694 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 TKTP29401 623 aaKnown RBP12.24□□□□□ -0.45
PTPN1-201ENST00000371621 HOXA13P31271 388 aaPredicted RBP12.24□□□□□ -0.45
PTPN1-201ENST00000371621 RXRGP48443 463 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 RCAN1P53805 252 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 PDIA6Q15084 440 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 PGS1Q32NB8 556 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 PDCD4Q53EL6 469 aaKnown RBP12.24□□□□□ -0.45
PTPN1-201ENST00000371621 IRF2BP2Q7Z5L9 587 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 DNAAF3Q8N9W5 541 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 NRG4Q8WWG1 115 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 ART4Q93070 314 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 OSBPL6Q9BZF3 934 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 TUBGCP4Q9UGJ1 667 aa12.24□□□□□ -0.45
PTPN1-201ENST00000371621 USP17L5A8MUK1 530 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 PARNO95453 639 aaKnown RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 DRG2P55039 364 aaKnown RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 STX1BP61266 288 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 FAAP100Q0VG06 881 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 MFSD5Q6N075 450 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 C16orf46Q6P387 395 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 TMEM270Q6UE05 265 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 DPP8Q6V1X1 898 aaPredicted RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 AFAP1L2Q8N4X5 818 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 BORCS5Q969J3 196 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 SRPK1Q96SB4 655 aaKnown RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 ABCB10Q9NRK6 738 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 SCHIP1Q9P0W5 487 aaPredicted RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 HNRNPDLO14979 420 aaKnown RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 TM7SF2O76062 418 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 EYA4O95677 639 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 OXSR1O95747 527 aaPredicted RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 MT-CO1P00395 513 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 SPATA31D3P0C874 917 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 P4HA1P13674 534 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 PRDX5P30044 214 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 RAD23AP54725 363 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 EFTUD2Q15029 972 aaKnown RBP eCLIP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 FAM182AQ5T1J6 154 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 BNC2Q6ZN30 1099 aaPredicted RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 LRRC55Q6ZSA7 311 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 SPATA31D4Q6ZUB0 917 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 RAVER1Q8IY67 606 aaKnown RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 CLEC4FQ8N1N0 589 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 FAM47BQ8NA70 645 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 BHLHE22Q8NFJ8 381 aaPredicted RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 DEPDC7Q96QD5 511 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 GRHL1Q9NZI5 618 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 ANGPTL3Q9Y5C1 460 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 GMEB1Q9Y692 573 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 DGKBQ9Y6T7 804 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 SYNJ2BP-COX16A0A087WUM0 186 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 PIK3CDO00329 1044 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 CYP27B1O15528 508 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 ENO2P09104 434 aaPredicted RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 PCP11498 1178 aaKnown RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 IREB2P48200 963 aaKnown RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 VAMP7P51809 220 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 PPATQ06203 517 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 GIT2Q14161 759 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 FASTKD3Q14CZ7 662 aaKnown RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 SPDYCQ5MJ68 293 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 OTUD3Q5T2D3 398 aaPredicted RBP12.23□□□□□ -0.45
PTPN1-201ENST00000371621 EMC10Q5UCC4 262 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 PDPK2PQ6A1A2 396 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 ASRGL1Q7L266 308 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 PLD3Q8IV08 490 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 SLFN12Q8IYM2 578 aa12.23□□□□□ -0.45
PTPN1-201ENST00000371621 FAM71DQ8N9W8 422 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms