RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CLCA2Q9UQC9 943 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 FAM86B1E9PN63 330 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 PROSCO94903 275 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 MAP3K6O95382 1288 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 FAM86B2P0C5J1 330 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 CXCL8P10145 99 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 ICE2Q659A1 982 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 TAGAPQ8N103 731 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 FUCA2Q9BTY2 467 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 DDX4Q9NQI0 724 aaKnown RBP20.4■□□□□ 0.86
LMO4-202ENST00000370544 EIF4E1BA6NMX2 242 aaKnown RBP20.4■□□□□ 0.86
LMO4-202ENST00000370544 TFRCP02786 760 aaKnown RBP20.4■□□□□ 0.86
LMO4-202ENST00000370544 MEI1Q5TIA1 1274 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 SV2AQ7L0J3 742 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 OLFM3Q96PB7 478 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 L2HGDHQ9H9P8 463 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 CPA4Q9UI42 421 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 CRLS1Q9UJA2 301 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 FBXO21O94952 628 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 THP07101 528 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 KRT16P08779 473 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 PTGISQ16647 500 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 SPOCD1Q6ZMY3 1216 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 DSEQ9UL01 958 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.4■□□□□ 0.86
LMO4-202ENST00000370544 RPS6KL1Q9Y6S9 549 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 STX7O15400 261 aaKnown RBP20.4■□□□□ 0.86
LMO4-202ENST00000370544 TMEM119Q4V9L6 283 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 SRLQ86TD4 932 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 PNMA5Q96PV4 448 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 USP18Q9UMW8 372 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 VPS9D1Q9Y2B5 631 aa20.4■□□□□ 0.86
LMO4-202ENST00000370544 AAR2Q9Y312 384 aaKnown RBP20.4■□□□□ 0.86
LMO4-202ENST00000370544 CLASP2O75122 1294 aaKnown RBP20.39■□□□□ 0.86
LMO4-202ENST00000370544 SEC24CP53992 1094 aa20.39■□□□□ 0.86
LMO4-202ENST00000370544 PTPN11Q06124 597 aaPredicted RBP20.39■□□□□ 0.86
LMO4-202ENST00000370544 MTFR1Q15390 333 aa20.39■□□□□ 0.86
LMO4-202ENST00000370544 FAM83EQ2M2I3 478 aa20.39■□□□□ 0.86
LMO4-202ENST00000370544 HS6ST3Q8IZP7 471 aa20.39■□□□□ 0.86
LMO4-202ENST00000370544 CYP2W1Q8TAV3 490 aa20.39■□□□□ 0.86
LMO4-202ENST00000370544 MDM1Q8TC05 714 aa20.39■□□□□ 0.86
LMO4-202ENST00000370544 MAP3K7CLP57077 242 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 PRPF39Q86UA1 669 aaKnown RBP20.39■□□□□ 0.85
LMO4-202ENST00000370544 MIB1Q86YT6 1006 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 EPS8L3Q8TE67 593 aaKnown RBP20.39■□□□□ 0.85
LMO4-202ENST00000370544 DACH2Q96NX9 599 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 RIC8BQ9NVN3 520 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 ARHGAP26Q9UNA1 814 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 LRRIQ3A6PVS8 624 aaPredicted RBP20.39■□□□□ 0.85
LMO4-202ENST00000370544 AKAP10O43572 662 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 TGFB3P10600 412 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 LHX1P48742 406 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 IRAK1P51617 712 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 CNGA3Q16281 694 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 POTEAQ6S8J7 498 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 EFL1Q7Z2Z2 1120 aaKnown RBP20.39■□□□□ 0.85
LMO4-202ENST00000370544 PGBD3Q8N328 593 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 BLOC1S5Q8TDH9 187 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 SLC5A5Q92911 643 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 THTPAQ9BU02 230 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 NEUROG2Q9H2A3 272 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 FAM95CA0A1B0GW59 222 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 RPLP2P05387 115 aaKnown RBP20.39■□□□□ 0.85
LMO4-202ENST00000370544 FLOT2Q14254 428 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 TIGD7Q6NT04 549 aaPredicted RBP20.39■□□□□ 0.85
LMO4-202ENST00000370544 OSMRQ99650 979 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 CNPY3Q9BT09 278 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 ITGA11Q9UKX5 1188 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 AP4E1Q9UPM8 1137 aa20.39■□□□□ 0.85
LMO4-202ENST00000370544 H3BRB1 525 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 HOXA2O43364 376 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 SLITRK3O94933 977 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 MCL1Q07820 350 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 C16orf87Q6PH81 154 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 CCNJLQ8IV13 435 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 PCSK9Q8NBP7 692 aaKnown RBP20.38■□□□□ 0.85
LMO4-202ENST00000370544 EXD1Q8NHP7 514 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 YIPF3Q9GZM5 350 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 TUT1Q9H6E5 874 aaKnown RBP20.38■□□□□ 0.85
LMO4-202ENST00000370544 HEATR9A2RTY3 570 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 EGFRP00533 1210 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 APOA4P06727 396 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 CCDC33Q8N5R6 958 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 LACRTQ9GZZ8 138 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 ITM2BQ9Y287 266 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 B2RBV5 119 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 SEC24DO94855 1032 aaPredicted RBP20.38■□□□□ 0.85
LMO4-202ENST00000370544 FAM107AO95990 144 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 RARRES1P49788 294 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 OAZ1P54368 228 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 WDR93Q6P2C0 686 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 FAM111AQ96PZ2 611 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 IDI2Q9BXS1 227 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 HDAC4P56524 1084 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 CTXN3Q4LDR2 81 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 OTOP1Q7RTM1 612 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 NIPA1Q7RTP0 329 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 BHMTQ93088 406 aa20.38■□□□□ 0.85
LMO4-202ENST00000370544 C2orf81A6NN90 581 aa20.37■□□□□ 0.85
LMO4-202ENST00000370544 BST2Q10589 180 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms