RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 ACTN4O43707 911 aaKnown RBP17.2■□□□□ 0.34
VMA21-202ENST00000370361 ATP2C2O75185 946 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 AKAP3O75969 853 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 RTN3O95197 1032 aaPredicted RBP17.2■□□□□ 0.34
VMA21-202ENST00000370361 NFATC1O95644 943 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 CST3P01034 146 aaPredicted RBP17.2■□□□□ 0.34
VMA21-202ENST00000370361 RPN1P04843 607 aaKnown RBP17.2■□□□□ 0.34
VMA21-202ENST00000370361 PDGFRBP09619 1106 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 PTPN1P18031 435 aaKnown RBP17.2■□□□□ 0.34
VMA21-202ENST00000370361 CDR1P51861 262 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 KRT85P78386 507 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 DNM1Q05193 864 aaKnown RBP17.2■□□□□ 0.34
VMA21-202ENST00000370361 TDRD10Q5VZ19 366 aaKnown RBP17.2■□□□□ 0.34
VMA21-202ENST00000370361 Q6ZS52 159 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 DCLK2Q8N568 766 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 B3GALNT2Q8NCR0 500 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 PDZD8Q8NEN9 1154 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 TTC8Q8TAM2 541 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 PARD3BQ8TEW8 1205 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 TAF4BQ92750 862 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 ACDQ96AP0 544 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 CCDC34Q96HJ3 373 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 P2RY13Q9BPV8 354 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 XYLT2Q9H1B5 865 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 SLC8A2Q9UPR5 921 aa17.2■□□□□ 0.34
VMA21-202ENST00000370361 DMXL1Q9Y485 3027 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 A8MXQ7 604 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 MAPK13O15264 365 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 GJA4P35212 333 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 FNTBP49356 437 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 SLC7A9P82251 487 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 ENPEPQ07075 957 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 BIRC3Q13489 604 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 ZNF699Q32M78 642 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 FOXD4L6Q3SYB3 417 aaPredicted RBP17.19■□□□□ 0.34
VMA21-202ENST00000370361 ZNF667Q5HYK9 610 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 MDH1BQ5I0G3 518 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 WDR44Q5JSH3 913 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 FSTL4Q6MZW2 842 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 FOXD4L3Q6VB84 417 aaPredicted RBP17.19■□□□□ 0.34
VMA21-202ENST00000370361 PRR23BQ6ZRT6 265 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 ARL14EPQ8N8R7 260 aaPredicted RBP17.19■□□□□ 0.34
VMA21-202ENST00000370361 STKLD1Q8NE28 680 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 TMC2Q8TDI7 906 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 SH3RF2Q8TEC5 729 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 PAGE5Q96GU1 130 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 LOXL4Q96JB6 756 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 FAM84AQ96KN4 292 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 MRPL45Q9BRJ2 306 aaKnown RBP17.19■□□□□ 0.34
VMA21-202ENST00000370361 DNAI2Q9GZS0 605 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 DMAC2Q9NW81 257 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 COMMD8Q9NX08 183 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 CDV3Q9UKY7 258 aaKnown RBP17.19■□□□□ 0.34
VMA21-202ENST00000370361 USP18Q9UMW8 372 aa17.19■□□□□ 0.34
VMA21-202ENST00000370361 HELZP42694 1942 aaKnown RBP17.19■□□□□ 0.34
VMA21-202ENST00000370361 CEP250Q9BV73 2442 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 ZNF840PA6NDX5 716 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 F8VP50 259 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 IKBKBO14920 756 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 HCRTO43612 131 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 CALUO43852 315 aaPredicted RBP17.18■□□□□ 0.34
VMA21-202ENST00000370361 KLRC4O43908 158 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 OLFM2O95897 454 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 MYL6P60660 151 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 EML3Q32P44 896 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 SCARA3Q6AZY7 606 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 TRIM68Q6AZZ1 485 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.18■□□□□ 0.34
VMA21-202ENST00000370361 ZNF516Q92618 1163 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 CD101Q93033 1021 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 SPATA32Q96LK8 384 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 NXF1Q9UBU9 619 aaKnown RBP17.18■□□□□ 0.34
VMA21-202ENST00000370361 SERTAD1Q9UHV2 236 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 FRMD4BQ9Y2L6 1034 aa17.18■□□□□ 0.34
VMA21-202ENST00000370361 FAM237AA0A1B0GTK4 181 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 C2orf78A6NCI8 922 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 OTOL1A6NHN0 477 aaPredicted RBP17.17■□□□□ 0.34
VMA21-202ENST00000370361 ARSAP15289 507 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 PFKFB1P16118 471 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 CASP1P29466 404 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 TUBP50607 506 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 NCOA4Q13772 614 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 NFIL3Q16649 462 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 RSPO4Q2I0M5 234 aaPredicted RBP17.17■□□□□ 0.34
VMA21-202ENST00000370361 SGSM1Q2NKQ1 1148 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 KMT5BQ4FZB7 885 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 CEP68Q76N32 757 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 NUP93Q8N1F7 819 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 KIAA0895Q8NCT3 520 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 SMARCD1Q96GM5 515 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 CYP2S1Q96SQ9 504 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 DUSP9Q99956 384 aaKnown RBP17.17■□□□□ 0.34
VMA21-202ENST00000370361 RTKNQ9BST9 563 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 SCAND2PQ9GZW5 306 aaPredicted RBP17.17■□□□□ 0.34
VMA21-202ENST00000370361 GZF1Q9H116 711 aaPredicted RBP17.17■□□□□ 0.34
VMA21-202ENST00000370361 KCTD10Q9H3F6 313 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 HPSEQ9Y251 543 aa17.17■□□□□ 0.34
VMA21-202ENST00000370361 LRRIQ3A6PVS8 624 aaPredicted RBP17.16■□□□□ 0.34
VMA21-202ENST00000370361 HRO43593 1189 aa17.16■□□□□ 0.34
VMA21-202ENST00000370361 RNF40O75150 1001 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms