RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ZCWPW1Q9H0M4 648 aa25.16■■□□□ 1.62
SNX3-203ENST00000368979 CTNNA1P35221 906 aaKnown RBP25.15■■□□□ 1.62
SNX3-203ENST00000368979 RFC1P35251 1148 aaPredicted RBP25.15■■□□□ 1.62
SNX3-203ENST00000368979 CKAP4Q07065 602 aaKnown RBP25.15■■□□□ 1.62
SNX3-203ENST00000368979 C7orf61Q8IZ16 206 aa25.15■■□□□ 1.62
SNX3-203ENST00000368979 NIPA2Q8N8Q9 360 aa25.15■■□□□ 1.62
SNX3-203ENST00000368979 MNS1Q8NEH6 495 aa25.15■■□□□ 1.62
SNX3-203ENST00000368979 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.15■■□□□ 1.62
SNX3-203ENST00000368979 PIWIL1Q96J94 861 aaKnown RBP25.15■■□□□ 1.62
SNX3-203ENST00000368979 PBKQ96KB5 322 aa25.15■■□□□ 1.62
SNX3-203ENST00000368979 SMOQ99835 787 aa25.15■■□□□ 1.62
SNX3-203ENST00000368979 AP1G2O75843 785 aa25.14■■□□□ 1.62
SNX3-203ENST00000368979 ALDH7A1P49419 539 aaKnown RBP25.14■■□□□ 1.62
SNX3-203ENST00000368979 SLC6A3Q01959 620 aa25.14■■□□□ 1.62
SNX3-203ENST00000368979 FAM117BQ6P1L5 589 aa25.14■■□□□ 1.62
SNX3-203ENST00000368979 ZMIZ2Q8NF64 920 aa25.14■■□□□ 1.62
SNX3-203ENST00000368979 KRT35Q92764 455 aa25.14■■□□□ 1.62
SNX3-203ENST00000368979 CSNK1G1Q9HCP0 422 aa25.14■■□□□ 1.62
SNX3-203ENST00000368979 TMEM30AQ9NV96 361 aa25.14■■□□□ 1.62
SNX3-203ENST00000368979 TMEM59LQ9UK28 342 aa25.14■■□□□ 1.62
SNX3-203ENST00000368979 CCDC66A2RUB6 948 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 PDE2AO00408 941 aaPredicted RBP25.13■■□□□ 1.61
SNX3-203ENST00000368979 FGBP02675 491 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 SCNN1AP37088 669 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 PEX5P50542 639 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 CACNA2D1P54289 1103 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 MAP3K7CLP57077 242 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 PIGHQ14442 188 aaPredicted RBP25.13■■□□□ 1.61
SNX3-203ENST00000368979 DCAF12L1Q5VU92 463 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 ZNF365Q70YC5 407 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 UBL4BQ8N7F7 174 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 ALG3Q92685 438 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 RNF14Q9UBS8 474 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 PCDHA3Q9Y5H8 950 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 PTPRDP23468 1912 aa25.13■■□□□ 1.61
SNX3-203ENST00000368979 MARCKSL1P49006 195 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 CDR1P51861 262 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 ZNF280DQ6N043 979 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 ZNF572Q7Z3I7 529 aaPredicted RBP25.12■■□□□ 1.61
SNX3-203ENST00000368979 CEP57Q86XR8 500 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 SCUBE3Q8IX30 993 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 RNF168Q8IYW5 571 aaPredicted RBP25.12■■□□□ 1.61
SNX3-203ENST00000368979 EMC1Q8N766 993 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 IGSF21Q96ID5 467 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 RHOBTB2Q9BYZ6 727 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 UBXN6Q9BZV1 441 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 CARD9Q9H257 536 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 CTIFO43310 598 aaKnown RBP25.12■■□□□ 1.61
SNX3-203ENST00000368979 TADA3O75528 432 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 LCP1P13796 627 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 EPHB4P54760 987 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 BTG3Q14201 252 aaPredicted RBP25.12■■□□□ 1.61
SNX3-203ENST00000368979 CTXN3Q4LDR2 81 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 KCNT2Q6UVM3 1135 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 C4orf50Q6ZRC1 276 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 DCP1BQ8IZD4 617 aaKnown RBP25.12■■□□□ 1.61
SNX3-203ENST00000368979 KHSRPQ92945 711 aaKnown RBP eCLIP25.12■■□□□ 1.61
SNX3-203ENST00000368979 B3GALT6Q96L58 329 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 EHD2Q9NZN4 543 aa25.12■■□□□ 1.61
SNX3-203ENST00000368979 OR6C75A6NL08 312 aa25.11■■□□□ 1.61
SNX3-203ENST00000368979 HHLA1C9JL84 531 aa25.11■■□□□ 1.61
SNX3-203ENST00000368979 OR4Q2P0C623 313 aa25.11■■□□□ 1.61
SNX3-203ENST00000368979 ADIGQ0VDE8 80 aa25.11■■□□□ 1.61
SNX3-203ENST00000368979 RTP2Q5QGT7 225 aa25.11■■□□□ 1.61
SNX3-203ENST00000368979 TMEM240Q5SV17 173 aa25.11■■□□□ 1.61
SNX3-203ENST00000368979 DAB2IPQ5VWQ8 1189 aa25.11■■□□□ 1.61
SNX3-203ENST00000368979 PSRC1Q6PGN9 363 aaPredicted RBP25.11■■□□□ 1.61
SNX3-203ENST00000368979 SLC26A9Q7LBE3 791 aa25.11■■□□□ 1.61
SNX3-203ENST00000368979 RASGEF1CQ8N431 466 aa25.11■■□□□ 1.61
SNX3-203ENST00000368979 CLEC4CQ8WTT0 213 aa25.11■■□□□ 1.61
SNX3-203ENST00000368979 MS4A14Q96JA4 679 aa25.11■■□□□ 1.61
SNX3-203ENST00000368979 KCNK16Q96T55 309 aa25.11■■□□□ 1.61
SNX3-203ENST00000368979 MRPL42Q9Y6G3 142 aaKnown RBP25.11■■□□□ 1.61
SNX3-203ENST00000368979 PATJQ8NI35 1801 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 UQCRHLA0A096LP55 91 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 CTAGE15A4D2H0 777 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 C2CD4BA6NLJ0 364 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 ZBBXA8MT70 800 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 F8VP50 259 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 TBC1D4O60343 1298 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 UQCRHP07919 91 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 CTAGE8P0CG41 777 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 LAG3P18627 525 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 BDNFP23560 247 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 PSMA2P25787 234 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 ADCY1Q08828 1119 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 CFAP221Q4G0U5 840 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 RAB41Q5JT25 222 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 CCDC181Q5TID7 509 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 TRNP1Q6NT89 227 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 TAS1R1Q7RTX1 841 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 CTAGE6Q86UF2 777 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 SPATA2LQ8IUW3 424 aaPredicted RBP25.1■■□□□ 1.61
SNX3-203ENST00000368979 CTAGE4Q8IX94 777 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 SLC39A11Q8N1S5 342 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 ZNF558Q96NG5 402 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 TTPALQ9BTX7 342 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 VN1R3Q9BXE9 311 aa25.1■■□□□ 1.61
SNX3-203ENST00000368979 DMAP1Q9NPF5 467 aaPredicted RBP25.1■■□□□ 1.61
SNX3-203ENST00000368979 EFCAB8A8MWE9 144 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms