RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 K7ENM7 598 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 THAP12O43422 761 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 ATP9AO75110 1047 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 HIP1RO75146 1068 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 LMNAP02545 664 aaKnown RBP12.12□□□□□ -0.47
USF1-201ENST00000368019 PLS3P13797 630 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 CYP11B1P15538 503 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 KCNA2P16389 499 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 TAC1P20366 129 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 SCP2P22307 547 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 KCNA5P22460 613 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 ALDH3A1P30838 453 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 IFNAR2P48551 515 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 SATB1Q01826 763 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 RNASELQ05823 741 aaKnown RBP12.12□□□□□ -0.47
USF1-201ENST00000368019 PPP3CAQ08209 521 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 GRIK3Q13003 919 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 SETDB1Q15047 1291 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 ACCSLQ4AC99 568 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 CEP55Q53EZ4 464 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 ZC3H12AQ5D1E8 599 aaKnown RBP12.12□□□□□ -0.47
USF1-201ENST00000368019 TMEM31Q5JXX7 168 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 CDCA2Q69YH5 1023 aaPredicted RBP12.12□□□□□ -0.47
USF1-201ENST00000368019 KRT39Q6A163 491 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 AADACL2Q6P093 401 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 DRICH1Q6PGQ1 229 aaPredicted RBP12.12□□□□□ -0.47
USF1-201ENST00000368019 TRIM72Q6ZMU5 477 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 BZW1Q7L1Q6 419 aaKnown RBP12.12□□□□□ -0.47
USF1-201ENST00000368019 TMEM192Q8IY95 271 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 DAW1Q8N136 415 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 ENDOVQ8N8Q3 282 aaKnown RBP12.12□□□□□ -0.47
USF1-201ENST00000368019 PIGOQ8TEQ8 1089 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 APBB2Q92870 758 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 CFAP57Q96MR6 1250 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 CCDC113Q9H0I3 377 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 TMEM8AQ9HCN3 771 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 ADAM22Q9P0K1 906 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 ASIC3Q9UHC3 531 aa12.12□□□□□ -0.47
USF1-201ENST00000368019 PIEZO1Q92508 2521 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 GSTTP1A0A1W2PQM5 241 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 GRXCR2A6NFK2 248 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 SFI1A8K8P3 1242 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 TMEM110-MUSTN1A8MSY1 372 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 SMNDC1O75940 238 aaKnown RBP eCLIP12.11□□□□□ -0.47
USF1-201ENST00000368019 UPP2O95045 317 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 KRT16P08779 473 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 IL9P15248 144 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 ITGB5P18084 799 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 ABCD1P33897 745 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 GCKP35557 465 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 SLCO1A2P46721 670 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 ITGA8P53708 1063 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 NCKAP1LP55160 1127 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 BPIFB4P59827 614 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 GCNT1Q02742 428 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 MGAT3Q09327 533 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 GPM6BQ13491 265 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 SPARCL1Q14515 664 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 CLEC16AQ2KHT3 1053 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 ANKS1BQ7Z6G8 1248 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 NLRX1Q86UT6 975 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 FITM2Q8N6M3 262 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 CEP120Q8N960 986 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 DDX1Q92499 740 aaKnown RBP12.11□□□□□ -0.47
USF1-201ENST00000368019 MAML1Q92585 1016 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 GPRASP2Q96D09 838 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 TBC1D31Q96DN5 1066 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 FAM122AQ96E09 287 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 VCPIP1Q96JH7 1222 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 KREMEN1Q96MU8 473 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 NT5C1BQ96P26 610 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 YME1L1Q96TA2 773 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 TUBB6Q9BUF5 446 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 DDX23Q9BUQ8 820 aaKnown RBP12.11□□□□□ -0.47
USF1-201ENST00000368019 TMEM117Q9H0C3 514 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 TLE6Q9H808 572 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 RC3H2Q9HBD1 1191 aaKnown RBP12.11□□□□□ -0.47
USF1-201ENST00000368019 HSPBP1Q9NZL4 362 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 ANAPC5Q9UJX4 755 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 LRRC42Q9Y546 428 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 KIAA1671Q9BY89 1806 aa12.11□□□□□ -0.47
USF1-201ENST00000368019 TCRBV7S2A1N4TA0A589 114 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 MBLAC1A4D2B0 266 aaPredicted RBP12.1□□□□□ -0.47
USF1-201ENST00000368019 C5orf67F2Z3F1 127 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 ASMTLO95671 621 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 P4HBP07237 508 aaKnown RBP12.1□□□□□ -0.47
USF1-201ENST00000368019 TCF7P36402 384 aaPredicted RBP12.1□□□□□ -0.47
USF1-201ENST00000368019 CETN2P41208 172 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 KLF1Q13351 362 aaPredicted RBP12.1□□□□□ -0.47
USF1-201ENST00000368019 CCDC142Q17RM4 750 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 TIGD5Q53EQ6 642 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 ANKRD20A2Q5SQ80 823 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 MARCH8Q5T0T0 291 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 ANKRD20A1Q5TYW2 823 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 ANKRD20A3Q5VUR7 823 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 PTCRAQ6ISU1 281 aaPredicted RBP12.1□□□□□ -0.47
USF1-201ENST00000368019 CGB2Q6NT52 195 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 TAF2Q6P1X5 1199 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 PADI6Q6TGC4 694 aa12.1□□□□□ -0.47
USF1-201ENST00000368019 CCDC25Q86WR0 208 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms