RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 FBXO10Q9UK96 956 aa12.06□□□□□ -0.48
SYNE1-204ENST00000367248 EVX2Q03828 476 aa12.06□□□□□ -0.48
SYNE1-204ENST00000367248 POLD3Q15054 466 aaPredicted RBP12.06□□□□□ -0.48
SYNE1-204ENST00000367248 FSCBQ5H9T9 825 aa12.06□□□□□ -0.48
SYNE1-204ENST00000367248 C4orf22Q6V702 233 aa12.06□□□□□ -0.48
SYNE1-204ENST00000367248 ABRAQ8N0Z2 381 aa12.06□□□□□ -0.48
SYNE1-204ENST00000367248 GBP7Q8N8V2 638 aaPredicted RBP12.06□□□□□ -0.48
SYNE1-204ENST00000367248 RFWD2Q8NHY2 731 aa12.06□□□□□ -0.48
SYNE1-204ENST00000367248 IL31RAQ8NI17 732 aa12.06□□□□□ -0.48
SYNE1-204ENST00000367248 CAMKK2Q96RR4 588 aa12.06□□□□□ -0.48
SYNE1-204ENST00000367248 CHMP2BQ9UQN3 213 aa12.06□□□□□ -0.48
SYNE1-204ENST00000367248 CBX4O00257 560 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 SPAG6O75602 509 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 PTRHD1Q6GMV3 140 aaKnown RBP12.05□□□□□ -0.48
SYNE1-204ENST00000367248 TPGS1Q6ZTW0 290 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 HAS1Q92839 578 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 PTPRN2Q92932 1015 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 DPP7Q9UHL4 492 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 TFR2Q9UP52 801 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 PSTPIP1O43586 416 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 FAM172AQ8WUF8 416 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 GAD1Q99259 594 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 SERPINI1Q99574 410 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 CENPKQ9BS16 269 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 MRPL9Q9BYD2 267 aaKnown RBP12.05□□□□□ -0.48
SYNE1-204ENST00000367248 FRMD8Q9BZ67 464 aaPredicted RBP12.05□□□□□ -0.48
SYNE1-204ENST00000367248 PORCNQ9H237 461 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 TRABDQ9H4I3 376 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 THG1LQ9NWX6 298 aaKnown RBP12.05□□□□□ -0.48
SYNE1-204ENST00000367248 XPO7Q9UIA9 1087 aaKnown RBP12.05□□□□□ -0.48
SYNE1-204ENST00000367248 YDJCA8MPS7 323 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 RAD51CO43502 376 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 AOC2O75106 756 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 TMCC1O94876 653 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 PTGER2P43116 358 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 GYS2P54840 703 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 E2F4Q16254 413 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 SLC20A1Q8WUM9 679 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 TATDN2Q93075 761 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 CNPY3Q9BT09 278 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 MIR1-1HGQ9H1L0 117 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 NFASCO94856 1347 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 CFAP99D6REC4 459 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 PROSCO94903 275 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 GFAPP14136 432 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 KCNA2P16389 499 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 ITGB5P18084 799 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 SLC8A1P32418 973 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 CCDC15Q0P6D6 951 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 PDAP1Q13442 181 aaKnown RBP12.05□□□□□ -0.48
SYNE1-204ENST00000367248 STARD3Q14849 445 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 C1orf186Q6ZWK4 172 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.05□□□□□ -0.48
SYNE1-204ENST00000367248 NT5DC4Q86YG4 428 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 APBA2Q99767 749 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 ERP44Q9BS26 406 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 FUCA2Q9BTY2 467 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 FAM95CA0A1B0GW59 222 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 ARHGAP10A1A4S6 786 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 FNTAP49354 379 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 MDM2Q00987 491 aaPredicted RBP12.05□□□□□ -0.48
SYNE1-204ENST00000367248 SPDYAQ5MJ70 313 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 ZNF571Q7Z3V5 609 aaPredicted RBP12.05□□□□□ -0.48
SYNE1-204ENST00000367248 OOSP2Q86WS3 158 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 FAM131BQ86XD5 332 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 FAM71DQ8N9W8 422 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 XAB2Q9HCS7 855 aaKnown RBP12.05□□□□□ -0.48
SYNE1-204ENST00000367248 GPATCH2LQ9NWQ4 482 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 ARHGEF38Q9NXL2 777 aa12.05□□□□□ -0.48
SYNE1-204ENST00000367248 ZNF263O14978 683 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 SYN1P17600 705 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 SERPINB9P50453 376 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 ARFIP2P53365 341 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 KYNUQ16719 465 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 NT5DC1Q5TFE4 455 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 FOXR1Q6PIV2 292 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 CCNI2Q6ZMN8 369 aaPredicted RBP12.04□□□□□ -0.48
SYNE1-204ENST00000367248 CALML6Q8TD86 181 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 LPPQ93052 612 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 FGFR1OP2Q9NVK5 253 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 CPSF2Q9P2I0 782 aaKnown RBP12.04□□□□□ -0.48
SYNE1-204ENST00000367248 BARX2Q9UMQ3 279 aaPredicted RBP12.04□□□□□ -0.48
SYNE1-204ENST00000367248 CYP3A7-CYP3A51PA0A087WV96 503 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 CYP3A7P24462 503 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 LRRC14Q15048 493 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 HIBCHQ6NVY1 386 aaPredicted RBP12.04□□□□□ -0.48
SYNE1-204ENST00000367248 FIBCD1Q8N539 461 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 UPF1Q92900 1129 aaKnown RBP eCLIP12.04□□□□□ -0.48
SYNE1-204ENST00000367248 PNKPQ96T60 521 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 ARHGAP20Q9P2F6 1191 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 HES2Q9Y543 173 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 SMIM24O75264 130 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 HAUS5O94927 633 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 AGTP01019 485 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 RFX3P48380 749 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 MCL1Q07820 350 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 CCDC85BQ15834 202 aaPredicted RBP12.04□□□□□ -0.48
SYNE1-204ENST00000367248 SH3RF1Q7Z6J0 888 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 MMGT1Q8N4V1 131 aa12.04□□□□□ -0.48
SYNE1-204ENST00000367248 KAT2BQ92831 832 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms