RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 NBPF12Q5TAG4 269 aaPredicted RBP20.53■□□□□ 0.88
TRIM58-201ENST00000366481 DLK2Q6UY11 383 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 C3orf62Q6ZUJ4 267 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 NME8Q8N427 588 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 DNAJC1Q96KC8 554 aaKnown RBP20.53■□□□□ 0.88
TRIM58-201ENST00000366481 OLFM3Q96PB7 478 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 NR1H4Q96RI1 486 aaPredicted RBP20.53■□□□□ 0.88
TRIM58-201ENST00000366481 PCDHB2Q9Y5E7 798 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 CCDC195A0A1B0GUA6 201 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 GCAP28676 217 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 NRLP54845 237 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 ALDH18A1P54886 795 aaKnown RBP20.53■□□□□ 0.88
TRIM58-201ENST00000366481 TMED1Q13445 227 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 MAMLD1Q13495 774 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 CCNG2Q16589 344 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 MARK2Q7KZI7 788 aaKnown RBP20.53■□□□□ 0.88
TRIM58-201ENST00000366481 SESTD1Q86VW0 696 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 EBF3Q9H4W6 596 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 TMEM165Q9HC07 324 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 CYP26B1Q9NR63 512 aa20.53■□□□□ 0.88
TRIM58-201ENST00000366481 RBAKQ9NYW8 714 aaPredicted RBP20.53■□□□□ 0.88
TRIM58-201ENST00000366481 VWA5AO00534 786 aa20.52■□□□□ 0.88
TRIM58-201ENST00000366481 PGM3O95394 542 aa20.52■□□□□ 0.88
TRIM58-201ENST00000366481 EPHB1P54762 984 aa20.52■□□□□ 0.88
TRIM58-201ENST00000366481 GEMIN4P57678 1058 aaKnown RBP20.52■□□□□ 0.88
TRIM58-201ENST00000366481 ACTR2P61160 394 aa20.52■□□□□ 0.88
TRIM58-201ENST00000366481 SP2Q02086 613 aa20.52■□□□□ 0.88
TRIM58-201ENST00000366481 CENPCQ03188 943 aa20.52■□□□□ 0.88
TRIM58-201ENST00000366481 KCNT1Q5JUK3 1230 aa20.52■□□□□ 0.88
TRIM58-201ENST00000366481 SLC26A7Q8TE54 656 aa20.52■□□□□ 0.88
TRIM58-201ENST00000366481 TPP2P29144 1249 aaPredicted RBP20.52■□□□□ 0.88
TRIM58-201ENST00000366481 MFSD7Q6UXD7 560 aa20.52■□□□□ 0.88
TRIM58-201ENST00000366481 PYDC1Q8WXC3 89 aa20.52■□□□□ 0.88
TRIM58-201ENST00000366481 OXNAD1Q96HP4 312 aaPredicted RBP20.52■□□□□ 0.88
TRIM58-201ENST00000366481 MYOZ2Q9NPC6 264 aa20.52■□□□□ 0.88
TRIM58-201ENST00000366481 DNAAF2Q9NVR5 837 aaKnown RBP20.52■□□□□ 0.88
TRIM58-201ENST00000366481 KANSL3Q9P2N6 904 aa20.52■□□□□ 0.88
TRIM58-201ENST00000366481 COL4A5P29400 1685 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 PROSCO94903 275 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 LYPLA2O95372 231 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 SERPINB6P35237 376 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 TNFSF9P41273 254 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 CDK7P50613 346 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 DBN1Q16643 649 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 FBXO27Q8NI29 283 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 SNRNP27Q8WVK2 155 aaKnown RBP20.51■□□□□ 0.87
TRIM58-201ENST00000366481 PTCD3Q96EY7 689 aaKnown RBP20.51■□□□□ 0.87
TRIM58-201ENST00000366481 MCEEQ96PE7 176 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 JPH1Q9HDC5 661 aaPredicted RBP20.51■□□□□ 0.87
TRIM58-201ENST00000366481 ANKEF1Q9NU02 776 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 IVNS1ABPQ9Y6Y0 642 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 SPECC1L-ADORA2AF8WAN1 911 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 CST3P01034 146 aaPredicted RBP20.51■□□□□ 0.87
TRIM58-201ENST00000366481 WEE2P0C1S8 567 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 LCA5Q86VQ0 697 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 RHPN2Q8IUC4 686 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.51■□□□□ 0.87
TRIM58-201ENST00000366481 TMEM121Q9BTD3 319 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 MSTO1Q9BUK6 570 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 DDX18Q9NVP1 670 aaKnown RBP20.51■□□□□ 0.87
TRIM58-201ENST00000366481 RNASEH1O60930 286 aaKnown RBP20.51■□□□□ 0.87
TRIM58-201ENST00000366481 SPATA31D3P0C874 917 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 SETSIPP0DME0 302 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 PHBP35232 272 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 SPATA31D4Q6ZUB0 917 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 VSIG10LQ86VR7 867 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 TMC2Q8TDI7 906 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 PAFAH2Q99487 392 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 ST6GALNAC4Q9H4F1 302 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 TJP2Q9UDY2 1190 aa20.51■□□□□ 0.87
TRIM58-201ENST00000366481 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.5■□□□□ 0.87
TRIM58-201ENST00000366481 I3L4J1 428 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 TYROBPO43914 113 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 KRT1P04264 644 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 ABHD2P08910 425 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 HIRAP54198 1017 aaPredicted RBP20.5■□□□□ 0.87
TRIM58-201ENST00000366481 ASPHQ12797 758 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 CDC16Q13042 620 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 HIF1AQ16665 826 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 MON1BQ7L1V2 547 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 DPH6Q7L8W6 267 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 RHOT1Q8IXI2 618 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 RBM15BQ8NDT2 890 aaKnown RBP20.5■□□□□ 0.87
TRIM58-201ENST00000366481 MEI4A8MW99 385 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 A8MXQ7 604 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 OR6B1O95007 311 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 GCNT1Q02742 428 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 LMNB2Q03252 620 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 CUL2Q13617 745 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 GRAMD1BQ3KR37 738 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 MMEL1Q495T6 779 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 ACBD5Q5T8D3 534 aaPredicted RBP20.5■□□□□ 0.87
TRIM58-201ENST00000366481 SATL1Q86VE3 508 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 ATP6V0A1Q93050 837 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 PPP2R3CQ969Q6 453 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 FBXL18Q96ME1 805 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 PPM1HQ9ULR3 514 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 SYNPO2Q9UMS6 1093 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 COMMD3-BMI1R4GMX3 469 aa20.5■□□□□ 0.87
TRIM58-201ENST00000366481 RBBP6Q7Z6E9 1792 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms