RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 ITGB3P05106 788 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 ITGB5P18084 799 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 JAM2P57087 298 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 GCNT1Q02742 428 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 FOXD4Q12950 439 aaPredicted RBP14.46□□□□□ -0.09
COL6A1-201ENST00000361866 PIGWQ7Z7B1 504 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 DEFB107AQ8IZN7 70 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 USP33Q8TEY7 942 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 ZNF669Q96BR6 464 aaPredicted RBP14.46□□□□□ -0.09
COL6A1-201ENST00000361866 UNKQ9C0B0 810 aaKnown RBP14.46□□□□□ -0.09
COL6A1-201ENST00000361866 MTFR1LQ9H019 292 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 TASP1Q9H6P5 420 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 SLC17A7Q9P2U7 560 aa14.46□□□□□ -0.09
COL6A1-201ENST00000361866 WARS2Q9UGM6 360 aaKnown RBP14.46□□□□□ -0.09
COL6A1-201ENST00000361866 H0YGN5 161 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 WDR46O15213 610 aaKnown RBP14.46□□□□□ -0.1
COL6A1-201ENST00000361866 PTGIRP43119 386 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 MCL1Q07820 350 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 MAMLD1Q13495 774 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 AMHR2Q16671 573 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 RSBN1LQ6PCB5 846 aaPredicted RBP14.46□□□□□ -0.1
COL6A1-201ENST00000361866 TMPRSS6Q8IU80 811 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 APOL2Q9BQE5 337 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 PDCD2LQ9BRP1 358 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 FAM96AQ9H5X1 160 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 VAV3Q9UKW4 847 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 USP18Q9UMW8 372 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 DTNAQ9Y4J8 743 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 NFS1Q9Y697 457 aa14.46□□□□□ -0.1
COL6A1-201ENST00000361866 PSMG1O95456 288 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 FLOT2Q14254 428 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 BMT2Q1RMZ1 405 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 FAM47CQ5HY64 1035 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 C6orf89Q6UWU4 347 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 C4orf19Q8IY42 314 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 MECRQ9BV79 373 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 CAAP1Q9H8G2 361 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 LRRC4CQ9HCJ2 640 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 TMEM59LQ9UK28 342 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 RPS6KL1Q9Y6S9 549 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 GAKO14976 1311 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 EDF1O60869 148 aaKnown RBP14.45□□□□□ -0.1
COL6A1-201ENST00000361866 SPAG6O75602 509 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 GPD1P21695 349 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 GARTP22102 1010 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 GLRBP48167 497 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 SNRPFP62306 86 aaKnown RBP14.45□□□□□ -0.1
COL6A1-201ENST00000361866 DENND5BQ6ZUT9 1274 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 GMCL1P1Q8NEA9 526 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 INPP5DQ92835 1189 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 ZNF317Q96PQ6 595 aaPredicted RBP14.45□□□□□ -0.1
COL6A1-201ENST00000361866 ZNF184Q99676 751 aaPredicted RBP14.45□□□□□ -0.1
COL6A1-201ENST00000361866 DDX18Q9NVP1 670 aaKnown RBP14.45□□□□□ -0.1
COL6A1-201ENST00000361866 APPL1Q9UKG1 709 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 FMN2Q9NZ56 1722 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 TM9SF1O15321 606 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 VIL1P09327 827 aaKnown RBP14.45□□□□□ -0.1
COL6A1-201ENST00000361866 MCF2P10911 925 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 ETS2P15036 469 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 EFNA5P52803 228 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 RNF220Q5VTB9 566 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 CES3Q6UWW8 571 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 POLNQ7Z5Q5 900 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 GLIS2Q9BZE0 524 aaPredicted RBP14.45□□□□□ -0.1
COL6A1-201ENST00000361866 NACA2Q9H009 215 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 TAGLN3Q9UI15 199 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 NRXN3Q9Y4C0 1643 aa14.45□□□□□ -0.1
COL6A1-201ENST00000361866 SLIT3O75094 1523 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 ZC3H4Q9UPT8 1303 aaKnown RBP14.44□□□□□ -0.1
COL6A1-201ENST00000361866 GNGT2O14610 69 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 SLC25A3Q00325 362 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 CDK16Q00536 496 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 ZNF268Q14587 947 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-201ENST00000361866 FOXR2Q6PJQ5 311 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 DENND2DQ9H6A0 471 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-201ENST00000361866 SLC39A10Q9ULF5 831 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 UBR1Q8IWV7 1749 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 DPPA5A6NC42 116 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 C5orf60A6NFR6 353 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 ZMPSTE24O75844 475 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 PROCP04070 461 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 PAEPP09466 180 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 SRGAP2BP0DMP2 458 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
COL6A1-201ENST00000361866 USP10Q14694 798 aaKnown RBP14.44□□□□□ -0.1
COL6A1-201ENST00000361866 RFWD2Q8NHY2 731 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 ATP6V1E2Q96A05 226 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 SPATA33Q96N06 139 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 IL1RL2Q9HB29 575 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 AVENQ9NQS1 362 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-201ENST00000361866 ARL8BQ9NVJ2 186 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 FAM198AQ9UFP1 575 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 LIASO43766 372 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 FOXN2P32314 431 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 RIPK1Q13546 671 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 ITGA9Q13797 1035 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 PDCD2Q16342 344 aaPredicted RBP14.44□□□□□ -0.1
COL6A1-201ENST00000361866 EFHC1Q5JVL4 640 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 MFSD5Q6N075 450 aa14.44□□□□□ -0.1
COL6A1-201ENST00000361866 OR6P1Q8NGX9 317 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms