RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 KATNAL1Q9BW62 490 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 SSU72Q9NP77 194 aaKnown RBP13.03□□□□□ -0.32
UBA3-202ENST00000361055 DDX56Q9NY93 547 aaKnown RBP13.03□□□□□ -0.32
UBA3-202ENST00000361055 RBAKQ9NYW8 714 aaPredicted RBP13.03□□□□□ -0.32
UBA3-202ENST00000361055 FETUBQ9UGM5 382 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 PHTF1Q9UMS5 762 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 NUB1Q9Y5A7 615 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 EVPLQ92817 2033 aa13.03□□□□□ -0.32
UBA3-202ENST00000361055 COL1A2P08123 1366 aa13.02□□□□□ -0.32
UBA3-202ENST00000361055 A0A0B4J269 797 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 TCRBV5S1A1TA0A578 114 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 MYADML2A6NDP7 307 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 K7ERI5 159 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 MAFO75444 373 aaPredicted RBP13.02□□□□□ -0.33
UBA3-202ENST00000361055 LSM8O95777 96 aaKnown RBP13.02□□□□□ -0.33
UBA3-202ENST00000361055 MYL3P08590 195 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 PECAM1P16284 738 aaPredicted RBP13.02□□□□□ -0.33
UBA3-202ENST00000361055 VCPP55072 806 aaKnown RBP13.02□□□□□ -0.33
UBA3-202ENST00000361055 PURAQ00577 322 aaKnown RBP13.02□□□□□ -0.33
UBA3-202ENST00000361055 PDE4CQ08493 712 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 MYO1EQ12965 1108 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 GPS1Q13098 491 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 PIGHQ14442 188 aaPredicted RBP13.02□□□□□ -0.33
UBA3-202ENST00000361055 EMC2Q15006 297 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 OASLQ15646 514 aaKnown RBP13.02□□□□□ -0.33
UBA3-202ENST00000361055 PKN2Q16513 984 aaKnown RBP13.02□□□□□ -0.33
UBA3-202ENST00000361055 RNASEH2BQ5TBB1 312 aaKnown RBP13.02□□□□□ -0.33
UBA3-202ENST00000361055 CENPUQ71F23 418 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 PCGF5Q86SE9 256 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 AGGF1Q8N302 714 aaeCLIP13.02□□□□□ -0.33
UBA3-202ENST00000361055 GLIS1Q8NBF1 620 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 SH3TC2Q8TF17 1288 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 PAIP2Q9BPZ3 127 aaKnown RBP13.02□□□□□ -0.33
UBA3-202ENST00000361055 PHACTR1Q9C0D0 580 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 ZNF518BQ9C0D4 1074 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 ETNK1Q9HBU6 452 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 SHOC2Q9UQ13 582 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 EFR3BQ9Y2G0 817 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.02□□□□□ -0.33
UBA3-202ENST00000361055 PTPRJQ12913 1337 aa13.02□□□□□ -0.33
UBA3-202ENST00000361055 POC1B-GALNT4F8VUJ3 575 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 PI4K2BG5E9Z4 385 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 GAS2O43903 313 aaKnown RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 EDF1O60869 148 aaKnown RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 SPAG7O75391 227 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 DCTN3O75935 186 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 RPSAP08865 295 aaKnown RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 ZSCAN5DPP0CG00 497 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 INSRRP14616 1297 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 CST5P28325 142 aaPredicted RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 GJC1P36383 396 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 NAMPTP43490 491 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 AP3M2P53677 418 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 CLNS1AP54105 237 aaKnown RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 RPL7AP62424 266 aaKnown RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 NOP14P78316 857 aaKnown RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 ADCY1Q08828 1119 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 TFDP3Q5H9I0 405 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 KAZNQ674X7 775 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 UBR7Q8N806 425 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 INPP5DQ92835 1189 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 LRRC37BQ96QE4 947 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 HAPLN2Q9GZV7 340 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 LRMDAQ9H2I8 198 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 STK38LQ9Y2H1 464 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 hCG_1818297A0A087WSY0 165 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 HAS3O00219 553 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 KRT1P04264 644 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 HSPA1AP0DMV8 641 aaKnown RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 HSPA1BP0DMV9 641 aaKnown RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 KRT15P19012 456 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 ARL2P36404 184 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 CTCFP49711 727 aaPredicted RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 MFSD10Q14728 455 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 FAM47EQ6ZV65 393 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 CTU1Q7Z7A3 348 aaKnown RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 VSIG1Q86XK7 387 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 NIPA2Q8N8Q9 360 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 KLHDC9Q8NEP7 349 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 ZBTB45Q96K62 511 aaPredicted RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 ANKRD27Q96NW4 1050 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 FRMD8P1Q9BZ68 369 aaPredicted RBP13.01□□□□□ -0.33
UBA3-202ENST00000361055 MYLK2Q9H1R3 596 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 TMEM134Q9H6X4 195 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 PCDH9Q9HC56 1237 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 TRIM33Q9UPN9 1127 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 CNTNAP2Q9UHC6 1331 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 SCN10AQ9Y5Y9 1956 aa13.01□□□□□ -0.33
UBA3-202ENST00000361055 IGKV6-21A0A0C4DH24 114 aa13□□□□□ -0.33
UBA3-202ENST00000361055 TYROBPO43914 113 aa13□□□□□ -0.33
UBA3-202ENST00000361055 ATF7P17544 494 aaPredicted RBP13□□□□□ -0.33
UBA3-202ENST00000361055 RPA3P35244 121 aaPredicted RBP13□□□□□ -0.33
UBA3-202ENST00000361055 PSEN2P49810 448 aa13□□□□□ -0.33
UBA3-202ENST00000361055 LBX1P52954 281 aa13□□□□□ -0.33
UBA3-202ENST00000361055 DNAJC3Q13217 504 aa13□□□□□ -0.33
UBA3-202ENST00000361055 NCOA4Q13772 614 aa13□□□□□ -0.33
UBA3-202ENST00000361055 WDR72Q3MJ13 1102 aa13□□□□□ -0.33
UBA3-202ENST00000361055 EFHC2Q5JST6 749 aa13□□□□□ -0.33
UBA3-202ENST00000361055 ZFYVE27Q5T4F4 411 aa13□□□□□ -0.33
UBA3-202ENST00000361055 RNF180Q86T96 592 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms