RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 PCED1BQ96HM7 432 aa22.08■■□□□ 1.13
MAP1LC3A-201ENST00000360668 SMARCAL1Q9NZC9 954 aa22.08■■□□□ 1.13
MAP1LC3A-201ENST00000360668 ADAM28Q9UKQ2 775 aa22.08■■□□□ 1.13
MAP1LC3A-201ENST00000360668 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.08■■□□□ 1.13
MAP1LC3A-201ENST00000360668 CLDN5O00501 218 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 SYN3O14994 580 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 EFCAB14O75071 495 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 GABBR2O75899 941 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 ITGB8P26012 769 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 MARCKSL1P49006 195 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 SLC6A3Q01959 620 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 MAPRE1Q15691 268 aaKnown RBP22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 OLFML1Q6UWY5 402 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 FAM35AQ86V20 835 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 RHOT1Q8IXI2 618 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 TMEM199Q8N511 208 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 RNPC3Q96LT9 517 aaKnown RBP22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 PKMYT1Q99640 499 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 FAN1Q9Y2M0 1017 aa22.08■■□□□ 1.12
MAP1LC3A-201ENST00000360668 H0YGN5 161 aa22.07■■□□□ 1.12
MAP1LC3A-201ENST00000360668 PAPSS1O43252 624 aaPredicted RBP22.07■■□□□ 1.12
MAP1LC3A-201ENST00000360668 OAZ2O95190 189 aa22.07■■□□□ 1.12
MAP1LC3A-201ENST00000360668 SLC11A1P49279 550 aa22.07■■□□□ 1.12
MAP1LC3A-201ENST00000360668 TSPY1Q01534 308 aa22.07■■□□□ 1.12
MAP1LC3A-201ENST00000360668 CLEC20AQ6ZU45 233 aa22.07■■□□□ 1.12
MAP1LC3A-201ENST00000360668 NOA1Q8NC60 698 aaKnown RBP22.07■■□□□ 1.12
MAP1LC3A-201ENST00000360668 KCTD13Q8WZ19 329 aa22.07■■□□□ 1.12
MAP1LC3A-201ENST00000360668 NAP1L3Q99457 506 aaPredicted RBP22.07■■□□□ 1.12
MAP1LC3A-201ENST00000360668 KRT82Q9NSB4 513 aa22.07■■□□□ 1.12
MAP1LC3A-201ENST00000360668 TMEM59LQ9UK28 342 aa22.07■■□□□ 1.12
MAP1LC3A-201ENST00000360668 PIK3R2O00459 728 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 DGKIO75912 1065 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 CSF2RAP15509 400 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 PSMA2P25787 234 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 C2orf54Q08AI8 447 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 ACAP1Q15027 740 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 BRD3Q15059 726 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 PIGZQ86VD9 579 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 MMGT1Q8N4V1 131 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 OR10T2Q8NGX3 314 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 MYLPFQ96A32 169 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 SMARCD1Q96GM5 515 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 PLVAPQ9BX97 442 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 PARD6BQ9BYG5 372 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 UBXN6Q9BZV1 441 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 MARCH5Q9NX47 278 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 RAB21Q9UL25 225 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 USTQ9Y2C2 406 aa22.06■■□□□ 1.12
MAP1LC3A-201ENST00000360668 F8VP50 259 aa22.05■■□□□ 1.12
MAP1LC3A-201ENST00000360668 AP1G2O75843 785 aa22.05■■□□□ 1.12
MAP1LC3A-201ENST00000360668 AMHP03971 560 aa22.05■■□□□ 1.12
MAP1LC3A-201ENST00000360668 GALTP07902 379 aa22.05■■□□□ 1.12
MAP1LC3A-201ENST00000360668 ELAVL2Q12926 359 aaKnown RBP22.05■■□□□ 1.12
MAP1LC3A-201ENST00000360668 SEL1L2Q5TEA6 688 aa22.05■■□□□ 1.12
MAP1LC3A-201ENST00000360668 LRRC38Q5VT99 294 aa22.05■■□□□ 1.12
MAP1LC3A-201ENST00000360668 CC2D1AQ6P1N0 951 aaPredicted RBP22.05■■□□□ 1.12
MAP1LC3A-201ENST00000360668 FBXO38Q6PIJ6 1188 aa22.05■■□□□ 1.12
MAP1LC3A-201ENST00000360668 SCUBE3Q8IX30 993 aa22.05■■□□□ 1.12
MAP1LC3A-201ENST00000360668 TOP1MTQ969P6 601 aa22.05■■□□□ 1.12
MAP1LC3A-201ENST00000360668 SF3B1O75533 1304 aaKnown RBP eCLIP22.05■■□□□ 1.12
MAP1LC3A-201ENST00000360668 TARSL2A2RTX5 802 aaKnown RBP22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 C2CD4BA6NLJ0 364 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 UPP2O95045 317 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 GPD1P21695 349 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 MCM3P25205 808 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 ZNF143P52747 638 aaPredicted RBP22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 TAS2R40P59535 323 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 RNASE9P60153 205 aaKnown RBP22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 ZNF211Q13398 564 aaPredicted RBP22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 ARCQ7LC44 396 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 EMC1Q8N766 993 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 CSNK1G1Q9HCP0 422 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 NR2E3Q9Y5X4 410 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 BEST1O76090 585 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 FGGP02679 453 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 PYGMP11217 842 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 LCP1P13796 627 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 MAP3K7CLP57077 242 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 DAB2IPQ5VWQ8 1189 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 SLC26A9Q7LBE3 791 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 KATNAL2Q8IYT4 538 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 KHSRPQ92945 711 aaKnown RBP eCLIP22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 PIWIL1Q96J94 861 aaKnown RBP22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 SMOQ99835 787 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 ANKZF1Q9H8Y5 726 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 RBM12Q9NTZ6 932 aaKnown RBP22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 ASNSD1Q9NWL6 643 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 HCSTQ9UBK5 93 aa22.04■■□□□ 1.12
MAP1LC3A-201ENST00000360668 DPYSL4O14531 572 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 ATP8B1O43520 1251 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 BAIAP3O94812 1187 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 FGFR3P22607 806 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 SSR1P43307 286 aaKnown RBP22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 BCAR1P56945 870 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 MRPL58Q14197 206 aaKnown RBP22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 LONRF2Q1L5Z9 754 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 VARS2Q5ST30 1063 aaKnown RBP22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 CCDC70Q6NSX1 233 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 FUT10Q6P4F1 479 aa22.03■■□□□ 1.12
MAP1LC3A-201ENST00000360668 C4orf50Q6ZRC1 276 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms