RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 GOLGA8SH3BPF8 625 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 TBC1D4O60343 1298 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 ARHGEF15O94989 841 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 RPL17P18621 184 aaKnown RBP23.07■■□□□ 1.28
HOXA4-201ENST00000360046 DNAJB2P25686 324 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 BMP8BP34820 402 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 GABRB2P47870 512 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 CACNA2D1P54289 1103 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 SNX16P57768 344 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 DSG1Q02413 1049 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 PIGZQ86VD9 579 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 XYLT1Q86Y38 959 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 TRIM58Q8NG06 486 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 SMOQ99835 787 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 SLC4A5Q9BY07 1137 aa23.07■■□□□ 1.28
HOXA4-201ENST00000360046 MRPL47Q9HD33 250 aaKnown RBP23.07■■□□□ 1.28
HOXA4-201ENST00000360046 PLXNA4Q9HCM2 1894 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 CA8P35219 290 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 MAMLD1Q13495 774 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 PLEKHA7Q6IQ23 1121 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 SPRED2Q7Z698 418 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 TDHQ8IZJ6 230 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 FBXO22Q8NEZ5 403 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 TPCN2Q8NHX9 752 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 KCNK16Q96T55 309 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 WDR35Q9P2L0 1181 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 STK39Q9UEW8 545 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 MSRAQ9UJ68 235 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 YBX2Q9Y2T7 364 aaKnown RBP23.06■■□□□ 1.28
HOXA4-201ENST00000360046 PCDHB5Q9Y5E4 795 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 BACE2Q9Y5Z0 518 aa23.06■■□□□ 1.28
HOXA4-201ENST00000360046 PALMO75781 387 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 TUBB4AP04350 444 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 LCP1P13796 627 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 CYP2F1P24903 491 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 TCEAL1Q15170 157 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 OR6B2Q6IFH4 312 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 TMEM110Q86TL2 294 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 C3orf20Q8ND61 904 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 HSFY1Q96LI6 401 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 SELENOOQ9BVL4 669 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 PBX4Q9BYU1 374 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 ALG13Q9NP73 1137 aaKnown RBP23.05■■□□□ 1.28
HOXA4-201ENST00000360046 DMAP1Q9NPF5 467 aaPredicted RBP23.05■■□□□ 1.28
HOXA4-201ENST00000360046 TMEM30AQ9NV96 361 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 CHD9Q3L8U1 2897 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 GRID2IPA4D2P6 1211 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 GJB6O95452 261 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 ACADSBP45954 432 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 GPR17Q13304 367 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 ZNF268Q14587 947 aaPredicted RBP23.05■■□□□ 1.28
HOXA4-201ENST00000360046 CFAP221Q4G0U5 840 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 CHRDL2Q6WN34 429 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 FAM183BPQ6ZVS7 135 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 ZMIZ2Q8NF64 920 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 AUTS2Q8WXX7 1259 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 FUBP3Q96I24 572 aaKnown RBP eCLIP23.05■■□□□ 1.28
HOXA4-201ENST00000360046 CYLDQ9NQC7 956 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 ANAPC7Q9UJX3 599 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 PCDHGC5Q9Y5F6 944 aa23.05■■□□□ 1.28
HOXA4-201ENST00000360046 MTA2O94776 668 aa23.04■■□□□ 1.28
HOXA4-201ENST00000360046 CSPG5O95196 566 aa23.04■■□□□ 1.28
HOXA4-201ENST00000360046 OR1D2P34982 312 aa23.04■■□□□ 1.28
HOXA4-201ENST00000360046 GRIK1P39086 918 aa23.04■■□□□ 1.28
HOXA4-201ENST00000360046 HADHBP55084 474 aaKnown RBP23.04■■□□□ 1.28
HOXA4-201ENST00000360046 SLC8B1Q6J4K2 584 aa23.04■■□□□ 1.28
HOXA4-201ENST00000360046 DCUN1D2Q6PH85 259 aa23.04■■□□□ 1.28
HOXA4-201ENST00000360046 DAAM2Q86T65 1068 aa23.04■■□□□ 1.28
HOXA4-201ENST00000360046 SCUBE3Q8IX30 993 aa23.04■■□□□ 1.28
HOXA4-201ENST00000360046 CALR3Q96L12 384 aaKnown RBP23.04■■□□□ 1.28
HOXA4-201ENST00000360046 PLVAPQ9BX97 442 aa23.04■■□□□ 1.28
HOXA4-201ENST00000360046 NKX2-4Q9H2Z4 354 aa23.04■■□□□ 1.28
HOXA4-201ENST00000360046 LRRC4Q9HBW1 653 aa23.04■■□□□ 1.28
HOXA4-201ENST00000360046 CSNK1G1Q9HCP0 422 aa23.04■■□□□ 1.28
HOXA4-201ENST00000360046 MRPL17Q9NRX2 175 aaKnown RBP23.04■■□□□ 1.28
HOXA4-201ENST00000360046 TMEM110-MUSTN1A8MSY1 372 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 F8VP50 259 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 ADAM12O43184 909 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 BUB1BO60566 1050 aaPredicted RBP23.03■■□□□ 1.28
HOXA4-201ENST00000360046 CASQ1P31415 396 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 ADIGQ0VDE8 80 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 RAB30Q15771 203 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 FAM102AQ5T9C2 384 aaPredicted RBP23.03■■□□□ 1.28
HOXA4-201ENST00000360046 RNF19BQ6ZMZ0 732 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 SCN4BQ8IWT1 228 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 SIX6OS1Q8N1H7 587 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 ATAD1Q8NBU5 361 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 MCRS1Q96EZ8 462 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 BTBD6Q96KE9 485 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 MCEEQ96PE7 176 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 TGS1Q96RS0 853 aaKnown RBP23.03■■□□□ 1.28
HOXA4-201ENST00000360046 GOLPH3Q9H4A6 298 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 METTL5Q9NRN9 209 aaKnown RBP23.03■■□□□ 1.28
HOXA4-201ENST00000360046 CHD7Q9P2D1 2997 aa23.03■■□□□ 1.28
HOXA4-201ENST00000360046 TCRBV5S1A1TA0A578 114 aa23.02■■□□□ 1.28
HOXA4-201ENST00000360046 MTMR11A4FU01 709 aa23.02■■□□□ 1.28
HOXA4-201ENST00000360046 GABBR2O75899 941 aa23.02■■□□□ 1.28
HOXA4-201ENST00000360046 KRT3P12035 628 aa23.02■■□□□ 1.28
HOXA4-201ENST00000360046 RPL34P49207 117 aaKnown RBP23.02■■□□□ 1.28
HOXA4-201ENST00000360046 GSCP56915 257 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms