RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 NLRP14Q86W24 1093 aa14.59□□□□□ -0.07
CSNK1E-201ENST00000359867 HACE1Q8IYU2 909 aa14.59□□□□□ -0.07
CSNK1E-201ENST00000359867 MAIP1Q8WWC4 291 aa14.59□□□□□ -0.07
CSNK1E-201ENST00000359867 TFAP2BQ92481 460 aa14.59□□□□□ -0.07
CSNK1E-201ENST00000359867 APBB2Q92870 758 aa14.59□□□□□ -0.07
CSNK1E-201ENST00000359867 HPDLQ96IR7 371 aa14.59□□□□□ -0.07
CSNK1E-201ENST00000359867 CCT8L2Q96SF2 557 aa14.59□□□□□ -0.07
CSNK1E-201ENST00000359867 FAM114A2Q9NRY5 505 aa14.59□□□□□ -0.07
CSNK1E-201ENST00000359867 PRKAG2Q9UGJ0 569 aa14.59□□□□□ -0.07
CSNK1E-201ENST00000359867 IP6K2Q9UHH9 426 aa14.59□□□□□ -0.07
CSNK1E-201ENST00000359867 AGAP1Q9UPQ3 857 aa14.59□□□□□ -0.07
CSNK1E-201ENST00000359867 NR2E1Q9Y466 385 aa14.59□□□□□ -0.07
CSNK1E-201ENST00000359867 MICAL3Q7RTP6 2002 aa14.58□□□□□ -0.07
CSNK1E-201ENST00000359867 PDCD11Q14690 1871 aaKnown RBP14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 PSTPIP1O43586 416 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 CILPO75339 1184 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 PARNO95453 639 aaKnown RBP14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 POMCP01189 267 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 ECHS1P30084 290 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 POLR2BP30876 1174 aaKnown RBP14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 MDH1P40925 334 aaKnown RBP14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 RAD23BP54727 409 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 SOX4Q06945 474 aaPredicted RBP14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 B4GALNT4Q76KP1 1039 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 MYCBPAPQ8TBZ2 947 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 BADQ92934 168 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 PLCD4Q9BRC7 762 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 LRRC4CQ9HCJ2 640 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 STRIP2Q9ULQ0 834 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 EME2A4GXA9 379 aaPredicted RBP14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 TTI1O43156 1089 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 SSTR3P32745 418 aaPredicted RBP14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 GATMP50440 423 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 DR1Q01658 176 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 IFT88Q13099 833 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 UAP1Q16222 522 aaPredicted RBP14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 C2CD6Q53TS8 623 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 CPNE8Q86YQ8 564 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 WDTC1Q8N5D0 677 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 C1orf131Q8NDD1 294 aaKnown RBP14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 UBLCP1Q8WVY7 318 aaPredicted RBP14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 TSPAN18Q96SJ8 248 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 TRIM7Q9C029 511 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 SDCBP2Q9H190 292 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 PCYOX1Q9UHG3 505 aa14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 ZMYND8Q9ULU4 1186 aaPredicted RBP14.58□□□□□ -0.08
CSNK1E-201ENST00000359867 RANBP2P49792 3224 aaKnown RBP14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 TTC3P53804 2025 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 TCRBV5S1A1TA0A578 114 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 TMEM191CA6NGB0 347 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 PPEF2O14830 753 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 FSCN2O14926 492 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 XKR4Q5GH76 650 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 CLLU1OSQ5K130 101 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 AADACL2Q6P093 401 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 CNKSR3Q6P9H4 555 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 TMCO2Q7Z6W1 182 aaPredicted RBP14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 ERICH1Q86X53 443 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 RHOT1Q8IXI2 618 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 KIRREL3Q8IZU9 778 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 TMEM199Q8N511 208 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 PRELID2Q8N945 189 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 TMEM176AQ96HP8 235 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 RASAL2Q9UJF2 1139 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 KIAA1257Q9ULG3 409 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 GIT1Q9Y2X7 761 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 CEP290O15078 2479 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 UPP2O95045 317 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 CD19P15391 556 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 CALRP27797 417 aaKnown RBP14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 HSPA9P38646 679 aaKnown RBP14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 RAP1GAPP47736 663 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 DRG2P55039 364 aaKnown RBP14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 CDH8P55286 799 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 INCA1Q0VD86 236 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 MYO1EQ12965 1108 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 ZBTB6Q15916 424 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 LLGL2Q6P1M3 1020 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 PHLDB2Q86SQ0 1253 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 C12orf50Q8NA57 414 aaPredicted RBP14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 SLC4A11Q8NBS3 891 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 PGBD4Q96DM1 585 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 TRIM31Q9BZY9 425 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 SMYD3Q9H7B4 428 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 TMBIM4Q9HC24 238 aa14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.57□□□□□ -0.08
CSNK1E-201ENST00000359867 GOLGA6L10A6NI86 522 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 VDRP11473 427 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 SKIP12755 728 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 KCNE1P15382 129 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 FAM189BP81408 668 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 SF3A3Q12874 501 aaKnown RBP eCLIP14.56□□□□□ -0.089e-8■■■■■ 35.8
CSNK1E-201ENST00000359867 DNAJC24Q6P3W2 148 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 ADAT2Q7Z6V5 191 aaKnown RBP14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 C3orf20Q8ND61 904 aa14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 MAGOHBQ96A72 148 aaKnown RBP14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 DDX27Q96GQ7 796 aaKnown RBP14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 PPP1R10Q96QC0 940 aaKnown RBP14.56□□□□□ -0.08
CSNK1E-201ENST00000359867 DPH5Q9H2P9 285 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms