RNA–Protein interactions for RNA: ENST00000359415.8

ARCN1-202, Transcript of archain 1, humanhuman

TSL 1 (best) BASIC

Gene ARCN1, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1-202ENST00000359415 GDF3Q9NR23 364 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 DDX43Q9NXZ2 648 aaKnown RBP6.76□□□□□ -1.33
ARCN1-202ENST00000359415 ASIC3Q9UHC3 531 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 PCDHGC3Q9UN70 934 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 C5orf42Q9H799 3197 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 MYBPHLA2RUH7 354 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 GRXCR2A6NFK2 248 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 GPR182O15218 404 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 PHF2O75151 1096 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 LRCH4O75427 683 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 UPP2O95045 317 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 LSM8O95777 96 aaKnown RBP6.76□□□□□ -1.33
ARCN1-202ENST00000359415 AXLP30530 894 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 HOXC8P31273 242 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 RPL21P46778 160 aaKnown RBP6.76□□□□□ -1.33
ARCN1-202ENST00000359415 CACNA2D1P54289 1103 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 HADHBP55084 474 aaKnown RBP6.76□□□□□ -1.33
ARCN1-202ENST00000359415 LHX8Q68G74 356 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 CAPN12Q6ZSI9 719 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 DEFB128Q7Z7B8 93 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 ZNF280BQ86YH2 543 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 UBE2Q2Q8WVN8 375 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 OSBPL8Q9BZF1 889 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 UPF3AQ9H1J1 476 aaKnown RBP6.76□□□□□ -1.33
ARCN1-202ENST00000359415 RSAD1Q9HA92 442 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 CYP3A43Q9HB55 503 aa6.76□□□□□ -1.33
ARCN1-202ENST00000359415 TET1Q8NFU7 2136 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 GOLGA6BA6NDN3 693 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 NT5C1B-RDH14C9J2C7 533 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 PAPSS1O43252 624 aaPredicted RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 FKTNO75072 461 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 CD4P01730 458 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 ECHS1P30084 290 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 MIPP30301 263 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 ARPP19P56211 112 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 PITX1P78337 314 aaPredicted RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 KRT17Q04695 432 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 MGAT3Q09327 533 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 INCA1Q0VD86 236 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 ADIGQ0VDE8 80 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 SIX1Q15475 284 aaPredicted RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 CNGA2Q16280 664 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 TIGD5Q53EQ6 642 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 ZC3H12AQ5D1E8 599 aaKnown RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 FAM117BQ6P1L5 589 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 NPNTQ6UXI9 565 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 CEP57Q86XR8 500 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 CD302Q8IX05 232 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 SH2D3CQ8N5H7 860 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 FBXO25Q8TCJ0 367 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 HHIPL1Q96JK4 782 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 CALR3Q96L12 384 aaKnown RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 PPP1R10Q96QC0 940 aaKnown RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 PEBP4Q96S96 227 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 ADAM33Q9BZ11 813 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 RNF208Q9H0X6 261 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 KRT82Q9NSB4 513 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 MTUS1Q9ULD2 1270 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 NR2E3Q9Y5X4 410 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 TCRBV5S1A1TA0A578 114 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 MAP2K7O14733 419 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 KPNA6O60684 536 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 CTNNA2P26232 953 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 COILP38432 576 aaPredicted RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 EPHB4P54760 987 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 SDHAF4Q5VUM1 108 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 RTN4RL1Q86UN2 441 aaPredicted RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 KCTD6Q8NC69 237 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 HNRNPLLQ8WVV9 542 aaKnown RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 ZNF560Q96MR9 790 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 TMUB1Q9BVT8 246 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 ZNF518BQ9C0D4 1074 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 TMEM30AQ9NV96 361 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 BCCIPQ9P287 314 aaKnown RBP eCLIP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 TTC3P53804 2025 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 GOLGA8MH3BSY2 632 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 CCDC188H7C350 402 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 RNASELQ05823 741 aaKnown RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 ITIH3Q06033 890 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 CA9Q16790 459 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 SV2CQ496J9 727 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 HSP90B2PQ58FF3 399 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 LCLAT1Q6UWP7 414 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 DNAJC14Q6Y2X3 702 aaPredicted RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 ZC3H18Q86VM9 953 aaKnown RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 B3GALNT2Q8NCR0 500 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 SLITRK1Q96PX8 696 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 NAP1L3Q99457 506 aaPredicted RBP6.75□□□□□ -1.33
ARCN1-202ENST00000359415 TMEM121Q9BTD3 319 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 DNAJB4Q9UDY4 337 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 NUDT5Q9UKK9 219 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 DNPEPQ9ULA0 475 aa6.75□□□□□ -1.33
ARCN1-202ENST00000359415 ERICH4A6NGS2 130 aa6.74□□□□□ -1.33
ARCN1-202ENST00000359415 SIGLEC16A6NMB1 481 aa6.74□□□□□ -1.33
ARCN1-202ENST00000359415 MCM3P25205 808 aa6.74□□□□□ -1.33
ARCN1-202ENST00000359415 SLC1A1P43005 524 aa6.74□□□□□ -1.33
ARCN1-202ENST00000359415 NME3Q13232 169 aa6.74□□□□□ -1.33
ARCN1-202ENST00000359415 PPP1R15BQ5SWA1 713 aa6.74□□□□□ -1.33
ARCN1-202ENST00000359415 C1orf228Q6PIY5 440 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms