RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 TSPAN16Q9UKR8 245 aa11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 PACSIN2Q9UNF0 486 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC4-201ENST00000359005 TANC1Q9C0D5 1861 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 CARNS1A5YM72 827 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 TMEM191CA6NGB0 347 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 DDX3YO15523 660 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 MEFVO15553 781 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 SART1O43290 800 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 ATMINO43313 823 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 ZRANB2O95218 330 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 FGGP02679 453 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 TNFRSF8P28908 595 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 CHRNA3P32297 505 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 RDXP35241 583 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 SCNN1AP37088 669 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 SSR1P43307 286 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 LMNB2Q03252 620 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 BST2Q10589 180 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 PDCLQ13371 301 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 TUSC3Q13454 348 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 DHX34Q14147 1143 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 SKIV2LQ15477 1246 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 SOWAHAQ2M3V2 549 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 ZFYVE27Q5T4F4 411 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 POLNQ7Z5Q5 900 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 RCOR2Q8IZ40 523 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 ANKRD52Q8NB46 1076 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 GRK7Q8WTQ7 553 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 ATXN2LQ8WWM7 1075 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 TFAP2BQ92481 460 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 ZNF689Q96CS4 500 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 HSFY1Q96LI6 401 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 FAM193BQ96PV7 902 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 GAD1Q99259 594 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 SDCBP2Q9H190 292 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 RNF39Q9H2S5 420 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 ELAC1Q9H777 363 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 ST7Q9NRC1 585 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 TMEM51Q9NW97 253 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 THEGQ9P2T0 379 aa11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 UTP11Q9Y3A2 253 aaKnown RBP11.32□□□□□ -0.6
TRAPPC4-201ENST00000359005 PTPRSQ13332 1948 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 PODXLO00592 558 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 PTGESO14684 152 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 INPPL1O15357 1258 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 DGKIO75912 1065 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 ERBB2P04626 1255 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 IBSPP21815 317 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 GPD2P43304 727 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 GUCY2FP51841 1108 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 MRPS5P82675 430 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 C2orf54Q08AI8 447 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 CUL1Q13616 776 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 CAMK1Q14012 370 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 SMC1AQ14683 1233 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 GOLGA7BQ2TAP0 167 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 DENND1BQ6P3S1 775 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 DCLRE1AQ6PJP8 1040 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 HDXQ7Z353 690 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 LIMS2Q7Z4I7 341 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 ACOT1Q86TX2 421 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 DNAAF5Q86Y56 855 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 ECHDC2Q86YB7 292 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 KATNAL2Q8IYT4 538 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 ABI1Q8IZP0 508 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 NOA1Q8NC60 698 aaKnown RBP11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 RNF169Q8NCN4 708 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 FBXO22Q8NEZ5 403 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 EXD1Q8NHP7 514 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 TSC1Q92574 1164 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 CD101Q93033 1021 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 MCEEQ96PE7 176 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 TRIM62Q9BVG3 475 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 FAM129AQ9BZQ8 928 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 ANKZF1Q9H8Y5 726 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 HCSTQ9UBK5 93 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 TMEM59LQ9UK28 342 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 CDH9Q9ULB4 789 aa11.31□□□□□ -0.6
TRAPPC4-201ENST00000359005 GBF1Q92538 1859 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 FAM187AA6NFU0 413 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 H3BNC9 293 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 PDE2AO00408 941 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 GRM6O15303 877 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 PSMA2P25787 234 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 BMPR1AP36894 532 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 PEX5P50542 639 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 GPM6BQ13491 265 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 EFHC1Q5JVL4 640 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 FAM102AQ5T9C2 384 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 EMBQ6PCB8 327 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 FBXO38Q6PIJ6 1188 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 AGMOQ6ZNB7 445 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 SYDE1Q6ZW31 735 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 ARCQ7LC44 396 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 CCDC50Q8IVM0 306 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 MAP7D3Q8IWC1 876 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 GOLGA6L1Q8N7Z2 621 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 B3GALNT2Q8NCR0 500 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 MCRS1Q96EZ8 462 aa11.3□□□□□ -0.6
TRAPPC4-201ENST00000359005 MS4A14Q96JA4 679 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms