RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 UBA3Q8TBC4 463 aa13.97□□□□□ -0.17
NFIX-201ENST00000358552 SLCO2A1Q92959 643 aa13.97□□□□□ -0.17
NFIX-201ENST00000358552 LPPQ93052 612 aa13.97□□□□□ -0.17
NFIX-201ENST00000358552 TBCBQ99426 244 aa13.97□□□□□ -0.17
NFIX-201ENST00000358552 LRRC19Q9H756 370 aa13.97□□□□□ -0.17
NFIX-201ENST00000358552 GOLGA2P5Q9HBQ8 144 aa13.97□□□□□ -0.17
NFIX-201ENST00000358552 FAM114A2Q9NRY5 505 aa13.97□□□□□ -0.17
NFIX-201ENST00000358552 MIOSQ9NXC5 875 aa13.97□□□□□ -0.17
NFIX-201ENST00000358552 TULP2O00295 520 aa13.96□□□□□ -0.17
NFIX-201ENST00000358552 HEXIM1O94992 359 aaKnown RBP13.96□□□□□ -0.17
NFIX-201ENST00000358552 PFKMP08237 780 aa13.96□□□□□ -0.17
NFIX-201ENST00000358552 PDGFRBP09619 1106 aa13.96□□□□□ -0.17
NFIX-201ENST00000358552 GPD1P21695 349 aa13.96□□□□□ -0.17
NFIX-201ENST00000358552 RFC1P35251 1148 aaPredicted RBP13.96□□□□□ -0.17
NFIX-201ENST00000358552 SSR1P43307 286 aaKnown RBP13.96□□□□□ -0.17
NFIX-201ENST00000358552 BOLA3Q53S33 107 aa13.96□□□□□ -0.17
NFIX-201ENST00000358552 PLEKHG4Q58EX7 1191 aa13.96□□□□□ -0.17
NFIX-201ENST00000358552 NOMO2Q5JPE7 1267 aa13.96□□□□□ -0.17
NFIX-201ENST00000358552 FAM102AQ5T9C2 384 aaPredicted RBP13.96□□□□□ -0.17
NFIX-201ENST00000358552 ABI1Q8IZP0 508 aa13.96□□□□□ -0.17
NFIX-201ENST00000358552 RNF169Q8NCN4 708 aa13.96□□□□□ -0.17
NFIX-201ENST00000358552 FAM193BQ96PV7 902 aaPredicted RBP13.96□□□□□ -0.17
NFIX-201ENST00000358552 OXCT2Q9BYC2 517 aaPredicted RBP13.96□□□□□ -0.17
NFIX-201ENST00000358552 MRPL9Q9BYD2 267 aaKnown RBP13.96□□□□□ -0.17
NFIX-201ENST00000358552 DDX43Q9NXZ2 648 aaKnown RBP13.96□□□□□ -0.17
NFIX-201ENST00000358552 CYTH4Q9UIA0 394 aa13.96□□□□□ -0.17
NFIX-201ENST00000358552 E5RJQ4 531 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 GOLGA8SH3BPF8 625 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 FGFR1P11362 822 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 NPR3P17342 541 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 SSTR3P32745 418 aaPredicted RBP13.95□□□□□ -0.18
NFIX-201ENST00000358552 RFC2P35250 354 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 PDE4CQ08493 712 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 C2CD6Q53TS8 623 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 CYP4A22Q5TCH4 519 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 WSCD1Q658N2 575 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 PMF1Q6P1K2 205 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 SLC26A9Q7LBE3 791 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 TTC30AQ86WT1 665 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 MAP7D3Q8IWC1 876 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 KLHL7Q8IXQ5 586 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 TTC13Q8NBP0 860 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 MYCBPAPQ8TBZ2 947 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 CCHCR1Q8TD31 782 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 SEC14L1Q92503 715 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 MAGOHBQ96A72 148 aaKnown RBP13.95□□□□□ -0.18
NFIX-201ENST00000358552 SUSD3Q96L08 255 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 TRIM62Q9BVG3 475 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 AP1M1Q9BXS5 423 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 MCOLN1Q9GZU1 580 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 PRDM16Q9HAZ2 1276 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 EHD2Q9NZN4 543 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 USTQ9Y2C2 406 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 PCDHB7Q9Y5E2 793 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 GOLGA6CA6NDK9 693 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 C2CD4BA6NLJ0 364 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 SYF2O95926 243 aaKnown RBP13.95□□□□□ -0.18
NFIX-201ENST00000358552 FAM200BP0CF97 657 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 GOLGA6DP0CG33 693 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 PDGFRAP16234 1089 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 LMO2P25791 158 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 SDC4P31431 198 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 DR1Q01658 176 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 SLC20A2Q08357 652 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 DSC1Q08554 894 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 ZNF211Q13398 564 aaPredicted RBP13.95□□□□□ -0.18
NFIX-201ENST00000358552 ORC1Q13415 861 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 CCNG2Q16589 344 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 PTPROQ16827 1216 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 TFDP3Q5H9I0 405 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 ZFYVE27Q5T4F4 411 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 SND1Q7KZF4 910 aaKnown RBP eCLIP13.95□□□□□ -0.18
NFIX-201ENST00000358552 CCDC50Q8IVM0 306 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 MREGQ8N565 214 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 SLC2A14Q8TDB8 520 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 SYT15Q9BQS2 421 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 TMEM106CQ9BVX2 250 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 OSBPL8Q9BZF1 889 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 PNPLA8Q9NP80 782 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 METTL5Q9NRN9 209 aaKnown RBP13.95□□□□□ -0.18
NFIX-201ENST00000358552 FAM49BQ9NUQ9 324 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 GOLGA6AQ9NYA3 693 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 RRN3Q9NYV6 651 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 SMARCAL1Q9NZC9 954 aa13.95□□□□□ -0.18
NFIX-201ENST00000358552 DMGDHQ9UI17 866 aaKnown RBP13.95□□□□□ -0.18
NFIX-201ENST00000358552 MEIS3P2A8K0S8 358 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 F8VP50 259 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 SYN3O14994 580 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 RAD51CO43502 376 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 POMCP01189 267 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 CXCL10P02778 98 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 PTPN9P43378 593 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 TSPY1Q01534 308 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 GUCY2DQ02846 1103 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 ELAVL2Q12926 359 aaKnown RBP13.94□□□□□ -0.18
NFIX-201ENST00000358552 MBTPS1Q14703 1052 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 DRICH1Q6PGQ1 229 aaPredicted RBP13.94□□□□□ -0.18
NFIX-201ENST00000358552 OLFML1Q6UWY5 402 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 SLC39A5Q6ZMH5 540 aa13.94□□□□□ -0.18
NFIX-201ENST00000358552 PHLDB2Q86SQ0 1253 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms