RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SRPK1Q96SB4 655 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 WWP1Q9H0M0 922 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 APOBEC3GQ9HC16 384 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ZNF302Q9NR11 478 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 PICK1Q9NRD5 415 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 SHOC2Q9UQ13 582 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 APOBEC2Q9Y235 224 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 LRCH1Q9Y2L9 728 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ACTL7BQ9Y614 415 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 NDC80O14777 642 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ZMPSTE24O75844 475 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 KRT38O76015 456 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 LDHAP00338 332 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 LINGO3P0C6S8 592 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 CCNB1P14635 433 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 PDGFRAP16234 1089 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 AMPD1P23109 780 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 HIC1Q14526 733 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 TAF5Q15542 800 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 DUOXA2Q1HG44 320 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 CCDC60Q8IWA6 550 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.86□□□□□ -1.311e-6■■■■■ 34.7
CSDE1-203ENST00000358528 ST13P4Q8IZP2 240 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 JOSD2Q8TAC2 188 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 RAB3IL1Q8TBN0 382 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ASAP3Q8TDY4 903 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 C7orf43Q8WVR3 580 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 FAM151AQ8WW52 585 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 VCX3BQ9H321 246 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 TJP2Q9UDY2 1190 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 POLIQ9UNA4 740 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 hCG_1818297A0A087WSY0 165 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 NEMP1O14524 444 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ALOX15BO15296 676 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 TBX10O75333 385 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 DGKIO75912 1065 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 CST3P01034 146 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 SNRPAP09012 282 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 MAPTP10636 758 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 OSBPP22059 807 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 SP100P23497 879 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 HMGCS2P54868 508 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 RPL10AP62906 217 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 SLC25A3Q00325 362 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ACVR2BQ13705 512 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 UBAP2LQ14157 1087 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 SGSM1Q2NKQ1 1148 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ZNF568Q3ZCX4 644 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ZACNQ401N2 412 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 SLC39A4Q6P5W5 647 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ASRGL1Q7L266 308 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 POLNQ7Z5Q5 900 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 MAP7D3Q8IWC1 876 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 ALKBH8Q96BT7 664 aaKnown RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 SLC7A6OSQ96CW6 309 aaPredicted RBP6.86□□□□□ -1.31
CSDE1-203ENST00000358528 KLC2Q9H0B6 622 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 TELO2Q9Y4R8 837 aa6.86□□□□□ -1.31
CSDE1-203ENST00000358528 DDX60LQ5H9U9 1706 aaKnown RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 ZNF862O60290 1169 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 GARTP22102 1010 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 KCNA4P22459 653 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 NCKAP1LP55160 1127 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 COG7P83436 770 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 C1QBPQ07021 282 aaKnown RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 BST1Q10588 318 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 TCHHL1Q5QJ38 904 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 TRIM42Q8IWZ5 723 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 OLIG1Q8TAK6 271 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 NSUN6Q8TEA1 469 aaKnown RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 CPT1BQ92523 772 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 FAM149B1Q96BN6 582 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 CEP41Q9BYV8 373 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 TAS2R1Q9NYW7 299 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 STRCP1A6NGW2 1772 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 SCN7AQ01118 1682 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 ATP8B3O60423 1300 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 MAGEA13PA6NCF6 341 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 BHMG1C9JSJ3 638 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 PRPF4O43172 522 aaKnown RBP eCLIP6.85□□□□□ -1.315e-7■■■■□ 22.3
CSDE1-203ENST00000358528 ABHD2P08910 425 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 ATP6V1B1P15313 513 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 ACADSP16219 412 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 GPX6P59796 221 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 CRADDP78560 199 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 EML3Q32P44 896 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 LRRC23Q53EV4 343 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 RNASEH2BQ5TBB1 312 aaKnown RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 ARMC3Q5W041 872 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 DENND1BQ6P3S1 775 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 SPATA24Q86W54 205 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 NIM1KQ8IY84 436 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 ABTB1Q969K4 478 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 NMD3Q96D46 503 aaKnown RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 GJD4Q96KN9 370 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 MFSD14AQ96MC6 490 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 TSNARE1Q96NA8 513 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 CENPKQ9BS16 269 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 DHX35Q9H5Z1 703 aaKnown RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 PXMP2Q9NR77 195 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 NRBP2Q9NSY0 501 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms