RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 EMID1Q96A84 441 aaPredicted RBP16.61■□□□□ 0.25
PHTF1-201ENST00000357783 L3MBTL3Q96JM7 780 aaPredicted RBP16.61■□□□□ 0.25
PHTF1-201ENST00000357783 ASNSD1Q9NWL6 643 aa16.61■□□□□ 0.25
PHTF1-201ENST00000357783 NKIRAS1Q9NYS0 192 aa16.61■□□□□ 0.25
PHTF1-201ENST00000357783 RBM47A0AV96 593 aaKnown RBP16.6■□□□□ 0.25
PHTF1-201ENST00000357783 BTBD19C9JJ37 291 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 STX2P32856 288 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 ITIH4Q14624 930 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 ZKSCAN8Q15776 578 aaPredicted RBP16.6■□□□□ 0.25
PHTF1-201ENST00000357783 C15orf59Q2T9L4 293 aaPredicted RBP16.6■□□□□ 0.25
PHTF1-201ENST00000357783 GOLGA7BQ2TAP0 167 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 NUGGCQ68CJ6 796 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 UNC45BQ8IWX7 931 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 CMASQ8NFW8 434 aaPredicted RBP16.6■□□□□ 0.25
PHTF1-201ENST00000357783 CKAP2Q8WWK9 683 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 NT5C1AQ9BXI3 368 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 FARP1Q9Y4F1 1045 aaPredicted RBP16.6■□□□□ 0.25
PHTF1-201ENST00000357783 ALOX15BO15296 676 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 NPTXRO95502 500 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 SMPD1P17405 629 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 GPD1P21695 349 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 RPL22P35268 128 aaKnown RBP16.6■□□□□ 0.25
PHTF1-201ENST00000357783 SCTRP47872 440 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 ZNF143P52747 638 aaPredicted RBP16.6■□□□□ 0.25
PHTF1-201ENST00000357783 EIF3EP60228 445 aaKnown RBP16.6■□□□□ 0.25
PHTF1-201ENST00000357783 DPP9Q86TI2 863 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 FAM71DQ8N9W8 422 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 RXFP2Q8WXD0 754 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 CPT1BQ92523 772 aa16.6■□□□□ 0.25
PHTF1-201ENST00000357783 FAM49AQ9H0Q0 323 aaPredicted RBP16.6■□□□□ 0.25
PHTF1-201ENST00000357783 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.6■□□□□ 0.25
PHTF1-201ENST00000357783 CCL15-CCL14A0A0B4J2E2 113 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 PPEF2O14830 753 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 SPAG7O75391 227 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 PDGFRAP16234 1089 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 NRLP54845 237 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 CDH6P55285 790 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 CCL15Q16663 113 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 CCDC142Q17RM4 750 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 LCLAT1Q6UWP7 414 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 PPIL6Q8IXY8 311 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 RIBC1Q8N443 379 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-201ENST00000357783 FBXO41Q8TF61 875 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 ADAM33Q9BZ11 813 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 KDM4CQ9H3R0 1056 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 SETD4Q9NVD3 440 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 SNX3O60493 162 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 ECM2O94769 699 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-201ENST00000357783 PFKMP08237 780 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 MMP3P08254 477 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 LACTB2Q53H82 288 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-201ENST00000357783 FNBP1LQ5T0N5 605 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 NPNTQ6UXI9 565 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 PCGF5Q86SE9 256 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 OR6J1Q8NGC5 347 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 P3H4Q92791 437 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 TGS1Q96RS0 853 aaKnown RBP16.59■□□□□ 0.25
PHTF1-201ENST00000357783 CNPY3Q9BT09 278 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 FRMD8P1Q9BZ68 369 aaPredicted RBP16.59■□□□□ 0.25
PHTF1-201ENST00000357783 KIF9Q9HAQ2 790 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 FAM49BQ9NUQ9 324 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 RNF19AQ9NV58 838 aa16.59■□□□□ 0.25
PHTF1-201ENST00000357783 C2CD4BA6NLJ0 364 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 APOC4-APOC2K7ER74 178 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 MCF2LO15068 1137 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 APOC2P02655 101 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 GRM5P41594 1212 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 ACAP1Q15027 740 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 MSS51Q4VC12 460 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 FAM182AQ5T1J6 154 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 ARHGEF18Q6ZSZ5 1173 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 ACOT1Q86TX2 421 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 TRABD2AQ86V40 505 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 SPATA18Q8TC71 538 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 PAIP2Q9BPZ3 127 aaKnown RBP16.58■□□□□ 0.25
PHTF1-201ENST00000357783 MRPL45Q9BRJ2 306 aaKnown RBP16.58■□□□□ 0.25
PHTF1-201ENST00000357783 SNTG2Q9NY99 539 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 SNX9Q9Y5X1 595 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 ACTL7BQ9Y614 415 aa16.58■□□□□ 0.25
PHTF1-201ENST00000357783 TCRBV7S3A2A0A539 114 aa16.58■□□□□ 0.24
PHTF1-201ENST00000357783 NDC80O14777 642 aa16.58■□□□□ 0.24
PHTF1-201ENST00000357783 RBP3P10745 1247 aa16.58■□□□□ 0.24
PHTF1-201ENST00000357783 KRT15P19012 456 aa16.58■□□□□ 0.24
PHTF1-201ENST00000357783 PCK1P35558 622 aa16.58■□□□□ 0.24
PHTF1-201ENST00000357783 ATP11AP98196 1134 aa16.58■□□□□ 0.24
PHTF1-201ENST00000357783 PKN2Q16513 984 aaKnown RBP16.58■□□□□ 0.24
PHTF1-201ENST00000357783 PPP1R26Q5T8A7 1209 aaPredicted RBP16.58■□□□□ 0.24
PHTF1-201ENST00000357783 ZC3H18Q86VM9 953 aaKnown RBP16.58■□□□□ 0.24
PHTF1-201ENST00000357783 NAT8LQ8N9F0 302 aa16.58■□□□□ 0.24
PHTF1-201ENST00000357783 ZMAT2Q96NC0 199 aaKnown RBP16.58■□□□□ 0.24
PHTF1-201ENST00000357783 MAK16Q9BXY0 300 aaKnown RBP16.58■□□□□ 0.24
PHTF1-201ENST00000357783 RSAD1Q9HA92 442 aa16.58■□□□□ 0.24
PHTF1-201ENST00000357783 HES2Q9Y543 173 aa16.58■□□□□ 0.24
PHTF1-201ENST00000357783 CLUHO75153 1309 aa16.57■□□□□ 0.24
PHTF1-201ENST00000357783 FAM47DPA6NHR8 397 aa16.57■□□□□ 0.24
PHTF1-201ENST00000357783 HNRNPH1P31943 449 aaKnown RBP16.57■□□□□ 0.24
PHTF1-201ENST00000357783 ARL4CP56559 192 aa16.57■□□□□ 0.24
PHTF1-201ENST00000357783 GPX6P59796 221 aa16.57■□□□□ 0.24
PHTF1-201ENST00000357783 CYP4V2Q6ZWL3 525 aaPredicted RBP16.57■□□□□ 0.24
PHTF1-201ENST00000357783 GPR142Q7Z601 462 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms