RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 TTC17Q96AE7 1141 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 PRICKLE1Q96MT3 831 aaPredicted RBP12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 CYTH2Q99418 400 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 PI4K2AQ9BTU6 479 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 MKS1Q9NXB0 559 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 SORCS3Q9UPU3 1222 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 CNTN6Q9UQ52 1028 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 IVNS1ABPQ9Y6Y0 642 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 VILLO15195 856 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 SLC16A4O15374 487 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 DHX15O43143 795 aaKnown RBP12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 PEX1O43933 1283 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 TMEM63AO94886 807 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 P4HBP07237 508 aaKnown RBP12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 SERPINA6P08185 405 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 RGS2P41220 211 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 PDE1BQ01064 536 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 PTK7Q13308 1070 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 R3HDM1Q15032 1099 aaKnown RBP12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 PGM2L1Q6PCE3 622 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 SATL1Q86VE3 508 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 RHPN2Q8IUC4 686 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 TMEM161BQ8NDZ6 487 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 SHKBP1Q8TBC3 707 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 SPIRE2Q8WWL2 714 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 DGCR14Q96DF8 476 aaKnown RBP12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 WWP1Q9H0M0 922 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 PARVAQ9NVD7 372 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 ADAMTS6Q9UKP5 1117 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 USTQ9Y2C2 406 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 EFR3BQ9Y2G0 817 aa12.65□□□□□ -0.38
SMARCAL1-201ENST00000357276 TMCC1O94876 653 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 KRT1P04264 644 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 CCDC166P0CW27 439 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 ATF7P17544 494 aaPredicted RBP12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 GDF10P55107 478 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 USP46P62068 366 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 TBL3Q12788 808 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 AOC3Q16853 763 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 PPP1R2P3Q6NXS1 205 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 RASSF3Q86WH2 238 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 RAB3IL1Q8TBN0 382 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 ZNF516Q92618 1163 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 RBM38Q9H0Z9 239 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 TCRBV7S3A2A0A539 114 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 CLCN2P51788 898 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 RPL7AP62424 266 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 FAAP100Q0VG06 881 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 BST1Q10588 318 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 CCNIQ14094 377 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 CFAP157Q5JU67 520 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 CCDC174Q6PII3 467 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 PRPF39Q86UA1 669 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 IGDCC3Q8IVU1 814 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 BTBD9Q96Q07 612 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 FRMD8P1Q9BZ68 369 aaPredicted RBP12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 KLHL4Q9C0H6 718 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 PNPLA8Q9NP80 782 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 SOX13Q9UN79 622 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 ZNF510Q9Y2H8 683 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 PLLPQ9Y342 182 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 A0A0B4J269 797 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 TCRBV9S1A1TA0A576 114 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 SDR42E2A6NKP2 422 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 SGK1O00141 431 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 POLR2MP0CAP2 368 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 ALDH1B1P30837 517 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 GJC1P36383 396 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 AQP4P55087 323 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 DLG1Q12959 904 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 TUBB3Q13509 450 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 MAP7Q14244 749 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 TAZQ16635 292 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 MAP3K21Q5TCX8 1036 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 TXNRD3NBQ6F5E7 133 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 GSTCDQ8NEC7 633 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 SRPK1Q96SB4 655 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 PPARGC1AQ9UBK2 798 aaKnown RBP12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 SYNPO2Q9UMS6 1093 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 EXOC7Q9UPT5 735 aa12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
SMARCAL1-201ENST00000357276 DDTLA6NHG4 134 aaPredicted RBP12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 PRR5-ARHGAP8B1AHC4 643 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 OR6B1O95007 311 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 BAG2O95816 211 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 RPL22P35268 128 aaKnown RBP12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 CHN2P52757 468 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 MRPS5P82675 430 aaKnown RBP12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 ARHGAP8P85298 464 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 KDSRQ06136 332 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 ANKRD20A4Q4UJ75 823 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 TMEM259Q4ZIN3 620 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 EFHC1Q5JVL4 640 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 STYK1Q6J9G0 422 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 FBXL19Q6PCT2 694 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 SH3BP5LQ7L8J4 393 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 TRIM42Q8IWZ5 723 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 NIPA2Q8N8Q9 360 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 C1orf112Q9NSG2 853 aa12.63□□□□□ -0.39
SMARCAL1-201ENST00000357276 TEX264Q9Y6I9 313 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms