RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 OSCP1Q8WVF1 389 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 SCFD1Q8WVM8 642 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 KBTBD7Q8WVZ9 684 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 MYLPFQ96A32 169 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 SYAP1Q96A49 352 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-204ENST00000356316 CGRRF1Q99675 332 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 P2RY13Q9BPV8 354 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 SLC39A2Q9NP94 309 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 HPS4Q9NQG7 708 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 PCDHA7Q9UN72 937 aa11.38□□□□□ -0.59
CAPN3-204ENST00000356316 GVINP1Q7Z2Y8 2422 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 A8MXQ7 604 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 TGFB1I1O43294 461 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 TACC1O75410 805 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 F13A1P00488 732 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 ARSAP15289 507 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 PFKLP17858 780 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 ATICP31939 592 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 GJA4P35212 333 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 AP3M2P53677 418 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 BIRC3Q13489 604 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 KNOP1Q1ED39 458 aaKnown RBP11.37□□□□□ -0.59
CAPN3-204ENST00000356316 MDH1BQ5I0G3 518 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 TDRD10Q5VZ19 366 aaKnown RBP11.37□□□□□ -0.59
CAPN3-204ENST00000356316 FSTL4Q6MZW2 842 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 LIMS2Q7Z4I7 341 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 WDR5BQ86VZ2 330 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 CAMKK1Q8N5S9 505 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 SH3RF2Q8TEC5 729 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 PCED1BQ96HM7 432 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 SLC22A12Q96S37 553 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 MRPL45Q9BRJ2 306 aaKnown RBP11.37□□□□□ -0.59
CAPN3-204ENST00000356316 ECT2Q9H8V3 914 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 CRTAC1Q9NQ79 661 aa11.37□□□□□ -0.59
CAPN3-204ENST00000356316 NXF1Q9UBU9 619 aaKnown RBP11.37□□□□□ -0.59
CAPN3-204ENST00000356316 RALGAPA1Q6GYQ0 2036 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 CCDC163A0A0D9SF12 145 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 C2orf78A6NCI8 922 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 OTOL1A6NHN0 477 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-204ENST00000356316 RNF40O75150 1001 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 RPP40O75818 363 aaKnown RBP11.36□□□□□ -0.59
CAPN3-204ENST00000356316 NFATC1O95644 943 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 EGFP01133 1207 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 CCDC192P0DO97 292 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 PTPN1P18031 435 aaKnown RBP11.36□□□□□ -0.59
CAPN3-204ENST00000356316 CASP1P29466 404 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 ATXN1P54253 815 aaKnown RBP11.36□□□□□ -0.59
CAPN3-204ENST00000356316 NOP14P78316 857 aaKnown RBP11.36□□□□□ -0.59
CAPN3-204ENST00000356316 SRSF5Q13243 272 aaKnown RBP11.36□□□□□ -0.59
CAPN3-204ENST00000356316 CUL4BQ13620 913 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 ZNF77Q15935 545 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 CSRP2Q16527 193 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 CCDC142Q17RM4 750 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 WDR44Q5JSH3 913 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 RESP18Q5W5W9 173 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 CACNA2D4Q7Z3S7 1137 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 FAM160A2Q8N612 972 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-204ENST00000356316 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 CD101Q93033 1021 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 C8orf48Q96LL4 319 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 SLITRK1Q96PX8 696 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 RTKNQ9BST9 563 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 ELOVL4Q9GZR5 314 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 SEMA4GQ9NTN9 838 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 GCNT4Q9P109 453 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 ARHGAP26Q9UNA1 814 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 WNT6Q9Y6F9 365 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 GREB1Q4ZG55 1949 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 DNAH14Q0VDD8 3507 aa11.36□□□□□ -0.59
CAPN3-204ENST00000356316 ATP8B3O60423 1300 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 ANAPC1Q9H1A4 1944 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-204ENST00000356316 F8VP50 259 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 SLC9A3R1O14745 358 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-204ENST00000356316 AXIN1O15169 862 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 TADA3O75528 432 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 STAU1O95793 577 aaKnown RBP11.35□□□□□ -0.59
CAPN3-204ENST00000356316 SLFN14P0C7P3 912 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 P4HA1P13674 534 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 TRIM21P19474 475 aaKnown RBP11.35□□□□□ -0.59
CAPN3-204ENST00000356316 TGM1P22735 817 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 PXNP49023 591 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-204ENST00000356316 MYL6P60660 151 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 IFRD2Q12894 506 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-204ENST00000356316 BMT2Q1RMZ1 405 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 EML3Q32P44 896 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 ZNF667Q5HYK9 610 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 C12orf56Q8IXR9 622 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 NUP93Q8N1F7 819 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 PDCD7Q8N8D1 485 aaKnown RBP11.35□□□□□ -0.59
CAPN3-204ENST00000356316 RPLP0P6Q8NHW5 317 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 GAB3Q8WWW8 586 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 ZNF516Q92618 1163 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 CCDC47Q96A33 483 aaKnown RBP11.35□□□□□ -0.59
CAPN3-204ENST00000356316 CHFRQ96EP1 664 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 TNIP3Q96KP6 325 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 MED10Q9BTT4 135 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 FBRSL1Q9HCM7 1045 aaKnown RBP11.35□□□□□ -0.59
CAPN3-204ENST00000356316 PARD6AQ9NPB6 346 aa11.35□□□□□ -0.59
CAPN3-204ENST00000356316 EXOC1Q9NV70 894 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms