RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 MROH8Q9H579 483 aa8.54□□□□□ -1.04
COMMD9-202ENST00000355500 ALPK3Q96L96 1907 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 DNAJC25-GNG10A0A024R161 153 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 IGKV6-21A0A0C4DH24 114 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 FAM187AA6NFU0 413 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 TMEM221A6NGB7 291 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 DDX3YO15523 660 aaKnown RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 TSPAN1O60635 241 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 MAFO75444 373 aaPredicted RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 FARP2O94887 1054 aaPredicted RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 TBXAS1P24557 533 aaPredicted RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 RAD52P43351 418 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 PTP4A2Q12974 167 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 STRN3Q13033 797 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 DHX34Q14147 1143 aaKnown RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 PLS1Q14651 629 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 C7orf61Q8IZ16 206 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 PLEKHO2Q8TD55 490 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 ATXN2LQ8WWM7 1075 aaKnown RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 FOXP3Q9BZS1 431 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 SLC13A1Q9BZW2 595 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 SPATC1LQ9H0A9 340 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 POLR3FQ9H1D9 316 aaPredicted RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 EPC1Q9H2F5 836 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 BCAS3Q9H6U6 928 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 RBM12Q9NTZ6 932 aaKnown RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 RAB20Q9NX57 234 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 TUBA8Q9NY65 449 aaPredicted RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 VTI1BQ9UEU0 232 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 MTUS1Q9ULD2 1270 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 INPP5FQ9Y2H2 1132 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 RALGAPA2Q2PPJ7 1873 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 COL1A2P08123 1366 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 GPR37L1O60883 481 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 CAPN3P20807 821 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 PLIN5Q00G26 463 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 FAM110CQ1W6H9 321 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 IER5Q5VY09 327 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 NEK5Q6P3R8 708 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 RSPH3Q86UC2 560 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 DDX42Q86XP3 938 aaKnown RBP eCLIP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 C12orf50Q8NA57 414 aaPredicted RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 ZNF540Q8NDQ6 660 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 BSNDQ8WZ55 320 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 FATE1Q969F0 183 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 CGRRF1Q99675 332 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 LRRC1Q9BTT6 524 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 TMUB1Q9BVT8 246 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 MTMR12Q9C0I1 747 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 ELP3Q9H9T3 547 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 UBE2TQ9NPD8 197 aaPredicted RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 TUBGCP4Q9UGJ1 667 aa8.53□□□□□ -1.04
COMMD9-202ENST00000355500 SEPT9Q9UHD8 586 aaPredicted RBP8.53□□□□□ -1.04
COMMD9-202ENST00000355500 ANKRD63C9JTQ0 380 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 AKAP10O43572 662 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 TMCC2O75069 709 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 CNMDO75829 334 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 SSTR3P32745 418 aaPredicted RBP8.52□□□□□ -1.04
COMMD9-202ENST00000355500 HSPA9P38646 679 aaKnown RBP8.52□□□□□ -1.04
COMMD9-202ENST00000355500 MXD4Q14582 209 aaPredicted RBP8.52□□□□□ -1.04
COMMD9-202ENST00000355500 CYP1B1Q16678 543 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 KYAT1Q16773 422 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 ZACNQ401N2 412 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 PLA2G4FQ68DD2 849 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 OTOP3Q7RTS5 596 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 GLYCTKQ8IVS8 523 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 ARHGEF19Q8IW93 802 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 ABRAQ8N0Z2 381 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 EFCAB3Q8N7B9 438 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 UBL4BQ8N7F7 174 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 SLC35G2Q8TBE7 412 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 MAIP1Q8WWC4 291 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 SLC7A3Q8WY07 619 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 CCDC113Q9H0I3 377 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 FAM114A2Q9NRY5 505 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 ZNF510Q9Y2H8 683 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 ANGPTL3Q9Y5C1 460 aa8.52□□□□□ -1.04
COMMD9-202ENST00000355500 CCDC169A6NNP5 214 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 NDC80O14777 642 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 TEX28O15482 410 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 ASAP2O43150 1006 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 NCK2O43639 380 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 DIAPH2O60879 1101 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 FTCDO95954 541 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 SKIP12755 728 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 OSBPP22059 807 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 UBA1P22314 1058 aaKnown RBP8.52□□□□□ -1.05
COMMD9-202ENST00000355500 SLC1A1P43005 524 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 POLGP54098 1239 aaPredicted RBP8.52□□□□□ -1.05
COMMD9-202ENST00000355500 PTENP60484 403 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 RACK1P63244 317 aaKnown RBP8.52□□□□□ -1.05
COMMD9-202ENST00000355500 DLG4P78352 724 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 PPFIA1Q13136 1202 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 MTMR3Q13615 1198 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 KSR1Q8IVT5 923 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 RNF168Q8IYW5 571 aaPredicted RBP8.52□□□□□ -1.05
COMMD9-202ENST00000355500 SEPT1Q8WYJ6 367 aa8.52□□□□□ -1.05
COMMD9-202ENST00000355500 DDX1Q92499 740 aaKnown RBP8.52□□□□□ -1.05
COMMD9-202ENST00000355500 SLCO2A1Q92959 643 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms