RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 COA1Q9GZY4 146 aa11.92□□□□□ -0.5
NUDCD3-202ENST00000355451 TMEM39AQ9NV64 488 aa11.92□□□□□ -0.5
NUDCD3-202ENST00000355451 RBP5P82980 135 aa11.92□□□□□ -0.5
NUDCD3-202ENST00000355451 PACS2Q86VP3 889 aa11.92□□□□□ -0.5
NUDCD3-202ENST00000355451 PJA1Q8NG27 643 aa11.92□□□□□ -0.5
NUDCD3-202ENST00000355451 SYTL5Q8TDW5 730 aaPredicted RBP11.92□□□□□ -0.5
NUDCD3-202ENST00000355451 CDADC1Q9BWV3 514 aa11.92□□□□□ -0.5
NUDCD3-202ENST00000355451 TIMM44O43615 452 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 CCNG1P51959 295 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 NDUFA8P51970 172 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 RBL2Q08999 1139 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 SMCO1Q147U7 214 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 ZNHIT3Q15649 155 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 MEA1Q16626 185 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 DAW1Q8N136 415 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 SMYD1Q8NB12 490 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 FBXO32Q969P5 355 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 GPRASP2Q96D09 838 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 MAGEB3O15480 346 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 POMCP01189 267 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 TRIM49P0CI25 452 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 TRIM49CP0CI26 452 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 MYBL1P10243 752 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 H2AFXP16104 143 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 RBM6P78332 1123 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 PLD1Q13393 1074 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 POLR1BQ9H9Y6 1135 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 SLC12A4Q9UP95 1085 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 PDS5AQ29RF7 1337 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 TBX3O15119 743 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 TRIM24O15164 1050 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 QARSP47897 775 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 DOK6Q6PKX4 331 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 ZNF227Q86WZ6 799 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 PEX5LQ8IYB4 626 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 DSN1Q9H410 356 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 STOML2Q9UJZ1 356 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 KIF24Q5T7B8 1368 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 NEURL1BA8MQ27 555 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 IDH3BO43837 385 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 FGAP02671 866 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 ZNF57Q68EA5 555 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 GTPBP1O00178 669 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 HOXA2O43364 376 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 RASGRP1O95267 797 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 ZNF682O95780 498 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 GH1P01241 217 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 GJA8P48165 433 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 LRRC63Q05C16 580 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 SUN3Q8TAQ9 357 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 ENTPD4Q9Y227 616 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 PQBP1O60828 265 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 MYL12AP19105 171 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 EIF4BP23588 611 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 GGCXP38435 758 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 DLG1Q12959 904 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 KIAA1324Q6UXG2 1013 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 TDRD3Q9H7E2 651 aaKnown RBP11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 VPS28Q9UK41 221 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 AXIN2Q9Y2T1 843 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 AIM2O14862 343 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 ME3Q16798 604 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 WDR72Q3MJ13 1102 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 CDH24Q86UP0 819 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 MYO1HQ8N1T3 1032 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 OR5T3Q8NGG3 340 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 COL26A1Q96A83 441 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 C18orf8Q96DM3 657 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 FOXP1Q9H334 677 aaPredicted RBP11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 GREM2Q9H772 168 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 SPTLC3Q9NUV7 552 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 ZNF232Q9UNY5 417 aa11.91□□□□□ -0.5
NUDCD3-202ENST00000355451 MRC2Q9UBG0 1479 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 ITCHQ96J02 903 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 ALG13Q9NP73 1137 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 MRGBPQ9NV56 204 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 CCL15-CCL14A0A0B4J2E2 113 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 VSTM5A8MXK1 200 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 PRPF3O43395 683 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 ANXA5P08758 320 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 CDK8P49336 464 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 ERFP50548 548 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 VAC14Q08AM6 782 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 CCL15Q16663 113 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 EIF2S3LQ2VIR3 472 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 SNF8Q96H20 258 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 AASDHPPTQ9NRN7 309 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 MYMKA6NI61 221 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 DTNBO60941 627 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 EFNA5P52803 228 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 STK4Q13043 487 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 NT5C1AQ9BXI3 368 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 C10orf88Q9H8K7 445 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 KHDRBS3O75525 346 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 PRKCBP05771 671 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 FAM200BP0CF97 657 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 SLC2A3P11169 496 aa11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 CLK2P49760 499 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 ALKBH5Q6P6C2 394 aaKnown RBP11.9□□□□□ -0.5
NUDCD3-202ENST00000355451 ANKMY2Q8IV38 441 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms