RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 SPOPO43791 374 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 GABBR2O75899 941 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 PROSCO94903 275 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 EFEMP2O95967 443 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 OR4Q2P0C623 313 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 BDNFP23560 247 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 CXCR5P32302 372 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 RFC1P35251 1148 aaPredicted RBP16.42■□□□□ 0.22
CTSA-202ENST00000354880 SLC1A1P43005 524 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 HTRA4P83105 476 aaPredicted RBP16.42■□□□□ 0.22
CTSA-202ENST00000354880 SLC39A12Q504Y0 691 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 RTP2Q5QGT7 225 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 OLFML1Q6UWY5 402 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 TAS1R1Q7RTX1 841 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 SCUBE3Q8IX30 993 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.42■□□□□ 0.22
CTSA-202ENST00000354880 KCTD13Q8WZ19 329 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 SMOQ99835 787 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 IP6K2Q9UHH9 426 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 NLRC5Q86WI3 1866 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 MIF4GDA9UHW6 222 aaKnown RBP16.42■□□□□ 0.22
CTSA-202ENST00000354880 LCP1P13796 627 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 CACNA2D1P54289 1103 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 SLC6A3Q01959 620 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 USP41Q3LFD5 358 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 ANKS3Q6ZW76 656 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 SPATA2LQ8IUW3 424 aaPredicted RBP16.42■□□□□ 0.22
CTSA-202ENST00000354880 RNF168Q8IYW5 571 aaPredicted RBP16.42■□□□□ 0.22
CTSA-202ENST00000354880 SLC39A11Q8N1S5 342 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 COLGALT1Q8NBJ5 622 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 ZMIZ2Q8NF64 920 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 JOSD2Q8TAC2 188 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 HERVK_113Q902F9 699 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 TMEM169Q96HH4 297 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 LBHD1Q9BQE6 289 aaPredicted RBP16.42■□□□□ 0.22
CTSA-202ENST00000354880 ZBED2Q9BTP6 218 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 RHOBTB2Q9BYZ6 727 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 CSNK1G1Q9HCP0 422 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 TMEM30AQ9NV96 361 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 PTPRDP23468 1912 aa16.42■□□□□ 0.22
CTSA-202ENST00000354880 H7C4K7 107 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 KCNK3O14649 394 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 NFE2Q16621 373 aaPredicted RBP16.41■□□□□ 0.22
CTSA-202ENST00000354880 WHAMMP3Q1A5X7 153 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 CPNE8Q86YQ8 564 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 FNIP1Q8TF40 1166 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 DPF3Q92784 378 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 CD101Q93033 1021 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 ABHD8Q96I13 439 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 PIWIL1Q96J94 861 aaKnown RBP16.41■□□□□ 0.22
CTSA-202ENST00000354880 KCNK16Q96T55 309 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 OXCT2Q9BYC2 517 aaPredicted RBP16.41■□□□□ 0.22
CTSA-202ENST00000354880 UBXN6Q9BZV1 441 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 LRRC4Q9HBW1 653 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 INSL6Q9Y581 213 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 SLC4A7Q9Y6M7 1214 aa16.41■□□□□ 0.22
CTSA-202ENST00000354880 ZNF185O15231 689 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 MAN1A1P33908 653 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 OGDHQ02218 1023 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 ZNF252P-AS1Q0IIN9 211 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 ADIGQ0VDE8 80 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 PIGHQ14442 188 aaPredicted RBP16.4■□□□□ 0.22
CTSA-202ENST00000354880 CFAP221Q4G0U5 840 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 EMC1Q8N766 993 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 UBL4BQ8N7F7 174 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 COG1Q8WTW3 980 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 FUBP3Q96I24 572 aaKnown RBP eCLIP16.4■□□□□ 0.22
CTSA-202ENST00000354880 CAPZA3Q96KX2 299 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 SLC9A7Q96T83 725 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 VN1R3Q9BXE9 311 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 DMAP1Q9NPF5 467 aaPredicted RBP16.4■□□□□ 0.22
CTSA-202ENST00000354880 SPG21Q9NZD8 308 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 TMEM59LQ9UK28 342 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 DDX3YO15523 660 aaKnown RBP16.4■□□□□ 0.22
CTSA-202ENST00000354880 TBC1D4O60343 1298 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 SOD2P04179 222 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 SCNN1AP37088 669 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 RNASE9P60153 205 aaKnown RBP16.4■□□□□ 0.22
CTSA-202ENST00000354880 FIBCD1Q8N539 461 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 NIPA2Q8N8Q9 360 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 PHOSPHO2Q8TCD6 241 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 CLEC4CQ8WTT0 213 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 PBKQ96KB5 322 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 CARD6Q9BX69 1037 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 MTIF3Q9H2K0 278 aaKnown RBP16.4■□□□□ 0.22
CTSA-202ENST00000354880 AAASQ9NRG9 546 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 CHST7Q9NS84 486 aa16.4■□□□□ 0.22
CTSA-202ENST00000354880 CCDC66A2RUB6 948 aa16.39■□□□□ 0.21
CTSA-202ENST00000354880 CES2O00748 559 aa16.39■□□□□ 0.21
CTSA-202ENST00000354880 SLU7O95391 586 aaKnown RBP16.39■□□□□ 0.21
CTSA-202ENST00000354880 CPB1P15086 417 aa16.39■□□□□ 0.21
CTSA-202ENST00000354880 PSMA2P25787 234 aa16.39■□□□□ 0.21
CTSA-202ENST00000354880 CTNNA1P35221 906 aaKnown RBP16.39■□□□□ 0.21
CTSA-202ENST00000354880 PPM1AP35813 382 aa16.39■□□□□ 0.21
CTSA-202ENST00000354880 TKTL1P51854 596 aa16.39■□□□□ 0.21
CTSA-202ENST00000354880 RAB41Q5JT25 222 aa16.39■□□□□ 0.21
CTSA-202ENST00000354880 KIAA1841Q6NSI8 718 aa16.39■□□□□ 0.21
CTSA-202ENST00000354880 PRSS55Q6UWB4 352 aaPredicted RBP16.39■□□□□ 0.21
CTSA-202ENST00000354880 SLC26A9Q7LBE3 791 aa16.39■□□□□ 0.21
CTSA-202ENST00000354880 CREG2Q8IUH2 290 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 520.5 ms